CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024995_P001	Maize	cytosol	52.48	33.53
OQU84013	Sorghum	cytosol	43.48	26.42
EES08977	Sorghum	cytosol	36.02	23.29
HORVU1Hr1G084670.1	Barley	cytosol	36.34	23.08
TraesCS1D01G391700.1	Wheat	cytosol	35.71	22.29
TraesCS1B01G410200.1	Wheat	cytosol, golgi, peroxisome	33.85	21.54
TraesCS1D01G391800.1	Wheat	cytosol, golgi, peroxisome	33.85	21.54
TraesCS1A01G383600.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	31.37	21.13
OQU84018	Sorghum	plasma membrane	35.4	21.11
TraesCS1B01G409900.1	Wheat	cytosol	32.92	20.87
TraesCS1B01G410000.1	Wheat	cytosol	31.99	20.2
KXG24308	Sorghum	cytosol	26.4	18.93
KXG24291	Sorghum	cytosol, nucleus, peroxisome	26.09	16.47
OQU79618	Sorghum	cytosol	22.05	16.44
OQU79990	Sorghum	nucleus, peroxisome, plastid	20.5	13.78
KXG21028	Sorghum	plastid	17.7	13.77

Protein Annotations

EnsemblPlants:OQU84015	EnsemblPlantsGene:SORBI_3005G216500	EntrezGene:8070232	InterPro:DUF247_pln	PANTHER:PTHR31549	PANTHER:PTHR31549:SF32
PFAM:PF03140	ProteinID:OQU84015	ProteinID:OQU84015.1	RefSeq:XP_002449988.1	UniParc:UPI0001A863C9	UniProt:A0A1Z5RKM6
MapMan:35.2	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:70215176..70216844

Molecular Weight (calculated)

36610.2 Da

IEP (calculated)

6.140

GRAVY (calculated)

-0.230

Length

322 amino acids

Sequence
(BLAST)

001: MEAAAAWDGP CEFQLANWTS EEPVAGLPVD YASIDIPGGA CGLQAYDEND VQLQLQQHLV EYYSAASQHN ITTSCEKAKV SDDNSDARCV AKQVVDQFKA
101: DMNMMKQKIH RYPACLGTVD KSYTVPRIVA LGPYHHGLEH LKKAEEVKHV AACHCTGEGK LLKEMYEVFI PVADCARHLY DKDVMEGISE DDFRHMMFFD
201: ACFLVQYMLM RASSRYKIDK SLKGFLSPNR RDIFHDVMLL ENQIPWMVVE VVMTFLMPMS SISKNFVYKM RRCMLPSDHR EPPEPKPFIW YEDYKPPHLL
301: GLLHYYIVGP CTALLGTGVP GP

Best Arabidopsis Sequence Match ( AT3G50140.2 )
(BLAST)

001: MATPSKRRPP PPPPPPPRLL VLPPLPPPPP PPPPQLPFGP KLPFPHIIIR RKARRNYQLR PMLTWYFLTF MMRQKLQTRN QQPEETREEW VIWIKDKMEQ
101: VMRDAATTSW DKICIYRVPL SLKKSDKNSY FPQAVSLGPY HHGDEHLRPM DYHKWRAVNM VMKRTKQGIE MYIDAMKELE ERARACYEGP IGLSSNKFTQ
201: MLVLDGCFVL DLFRGAYEGF SKLGYDRNDP VFAMRGSMHS IRRDMLMLEN QLPLFVLNRL LELQLGTQYQ TGLVAQLAVR FFNPLMPTYM SSTKIENSQE
301: NNNKFFNPIA DKEKEELHCL DVFRRSLLQP SLKPDPRLSR SRWSRKPLVA DKRQQQLLHC VTELREAGIK FKRRKSDRFW DIQFKNGCLE IPKLLIHDGK
401: FTLFSFYLFL RSFV

Arabidopsis Description

Transmembrane protein, putative (DUF247) [Source:UniProtKB/TrEMBL;Acc:F4IZB4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.