Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0182500-02 | Rice | cytosol | 19.38 | 11.52 |
| Os12t0596800-01 | Rice | plasma membrane | 17.65 | 10.49 |
| Os03t0626600-01 | Rice | plasma membrane | 17.65 | 10.39 |
| Os03t0267800-01 | Rice | cytosol | 16.95 | 9.78 |
Protein Annotations
| MapMan:18.3.4.1.3.2 | EntrezGene:4352700 | ProteinID:ABA99198.1 | EMBL:AK100450 | ProteinID:BAF30208.1 | ProteinID:BAT17928.1 |
| ProteinID:EEE53536.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005789 | GO:GO:0006464 | GO:GO:0006506 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | EnsemblPlantsGene:Os12g0596900 |
| EnsemblPlants:Os12t0596900-01 | PFAM:PF08320 | InterPro:PIG-X/PBN1 | PANTHER:PTHR28650 | UniProt:Q2QMP3 | SMART:SM00780 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000680CD5 | RefSeq:XP_015618393.1 | SEG:seg | : |
Description
Glycosylphosphatidylinositol-mannosyltransferase I, PIG-X/PBN1 domain containing protein. (Os12t0596900-01)
Coordinates
chr12:+:25057086..25060655
Molecular Weight (calculated)
31535.6 Da
IEP (calculated)
4.463
GRAVY (calculated)
0.178
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAASGPWLL VVVVAWVLGV AAASSSSSSP GQAGTSQKFN KCMPCSRRYV ADSYLDTLIG QLAQHRDLTE TSDSADSCKG LDYDLDAPML TELHSELVGE
101: GSHRRLVYHV EFANCADAMV NFLDNYDANL VVIENLPNGV FADPFELQHF VERKVYLDMV VFGDTNLELP SALSNRSSVE IHVDLAPLAS MNCNLVIDLP
201: LHARYPPLDA SGYATVEFGS PDLLLRYRKK DTVPESCSWL LKDLDAAPVE KATWRIPCGD EAHIGFVSSI TFLSALVCSI LIVIAALFY
101: GSHRRLVYHV EFANCADAMV NFLDNYDANL VVIENLPNGV FADPFELQHF VERKVYLDMV VFGDTNLELP SALSNRSSVE IHVDLAPLAS MNCNLVIDLP
201: LHARYPPLDA SGYATVEFGS PDLLLRYRKK DTVPESCSWL LKDLDAAPVE KATWRIPCGD EAHIGFVSSI TFLSALVCSI LIVIAALFY
001: MGFFRAATHP DDLRRRVPSP AIMLKSMGSQ RRRSVIALIF ICCAISSTSS DQVGTNYRDS HEFFDSDTIC ISDQYIMESY FTTYTSLDDS EFRNFLLLQQ
101: CSDKVPTQDS NIVPATSFIQ HRNITGEGSH RNLITSIKLL LHHSESQFRE LVIVERLPLG VFADPFELQS LQQRRAFSDV SVFGDTNLEL PSFRSNRSVV
201: EIHVEISSRN YENGEISFKL PLHARYQPLD DSGYSRVEFG EPDLFLCSSH VQNQRRERRR CLVLSIGRSK TETRSVFWDI PAGIRGHTEY VSALTFAAAV
301: FSAFSILVAS VLSSKGESCK NLKQS
101: CSDKVPTQDS NIVPATSFIQ HRNITGEGSH RNLITSIKLL LHHSESQFRE LVIVERLPLG VFADPFELQS LQQRRAFSDV SVFGDTNLEL PSFRSNRSVV
201: EIHVEISSRN YENGEISFKL PLHARYQPLD DSGYSRVEFG EPDLFLCSSH VQNQRRERRR CLVLSIGRSK TETRSVFWDI PAGIRGHTEY VSALTFAAAV
301: FSAFSILVAS VLSSKGESCK NLKQS
Arabidopsis Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). [Source:TAIR;Acc:AT5G46850]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.