Factsheet for Os03t0267800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39715	Sorghum	endoplasmic reticulum	84.83	83.66
TraesCS4A01G093500.1	Wheat	endoplasmic reticulum	83.43	81.8
HORVU4Hr1G060560.7	Barley	cytosol	83.03	81.73
TraesCS4D01G211600.2	Wheat	endoplasmic reticulum	83.23	81.6
Zm00001d028567_P001	Maize	mitochondrion	78.04	76.07
TraesCS4B01G210900.3	Wheat	cytosol	81.84	75.93
Zm00001d047837_P003	Maize	cytosol	72.26	70.57
GSMUA_Achr5P07030_001	Banana	cytosol	63.27	67.59
GSMUA_Achr10P...	Banana	mitochondrion	63.67	67.58
GSMUA_Achr8P19520_001	Banana	cytosol	59.68	62.95
PGSC0003DMT400069927	Potato	cytosol	54.69	61.16
KRG97826	Soybean	cytosol	51.9	59.09
VIT_13s0019g02430.t01	Wine grape	plastid	57.68	57.23
KRH15044	Soybean	cytosol	56.29	55.95
Solyc05g052910.2.1	Tomato	plastid	55.89	55.56
CDY07633	Canola	plastid	55.89	54.58
Bra000152.1-P	Field mustard	plastid	55.69	54.28
CDY61785	Canola	plastid	55.69	54.07
Os06t0182500-02	Rice	cytosol	52.1	53.7
KRH31044	Soybean	nucleus	54.09	53.24
CDX74829	Canola	cytosol, plastid	55.09	52.37
CDY20486	Canola	cytosol, plastid	54.49	51.9
AT2G39830.2	Thale cress	cytosol, plastid	54.69	51.6
Bra005011.1-P	Field mustard	cytosol, plastid	51.1	51.1
Solyc03g079910.2.1	Tomato	cytosol	55.89	51.0
KRH73095	Soybean	plastid	57.09	50.98
PGSC0003DMT400055872	Potato	cytosol	52.49	49.91
Os03t0626600-01	Rice	plasma membrane	48.9	49.9
Os12t0596800-01	Rice	plasma membrane	48.3	49.79
Os12t0596900-01	Rice	extracellular, plasma membrane	9.78	16.95

Protein Annotations

MapMan:19.2.2.1.7	Gene3D:2.10.110.10	EntrezGene:4332368	ProteinID:ABF95162.1	ProteinID:BAF11582.1	ProteinID:BAS83432.1
InterPro:DA1-like	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR001781	EnsemblPlantsGene:Os03g0267800
EnsemblPlants:Os03t0267800-01	PFAM:PF00412	PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023	PANTHER:PTHR24209
PANTHER:PTHR24209:SF21	UniProt:Q10NJ6	SMART:SM00132	SUPFAM:SSF57716	UniParc:UPI0000DB41A1	RefSeq:XP_015632414.1
InterPro:Znf_LIM	SEG:seg	:	:	:	:

Description

Zinc finger, LIM-type domain containing protein. (Os03t0267800-01)

Coordinates

chr3:-:8870192..8875401

Molecular Weight (calculated)

57174.3 Da

IEP (calculated)

8.042

GRAVY (calculated)

-0.691

Length

501 amino acids

Sequence
(BLAST)

001: MAYSSRSCDQ CSHERRSGFM KWLCAFLKGT KDGEANRRRP RVTAGEETTL WEEPVRPKKE EPPRHNNEEM DHALALALAD DAKNTKERNH DKGENDEELA
101: RAIQDSLNMN PYQPYNPCAP SQTQARSRGY RVCGGCKHEI GHGHYLSCLG MYWHPQCFRC SSCRHPIREM EFTLLGTDPY HKLCYKELHH PKCDVCLQFI
201: PTNRTGLIEY RAHPFWGQKY CPLHEHDRTP RCCSCEKMEP RNTKYMSLGD GRSLCMECLD SAIMDTGECQ PLYHSIRDYY EGMNMKLDQQ IPMLLVERQA
301: LNEAMEGESK GPHHMPETRG LCLSEEQTVT SILRRPRIGA NRLLDMKTQP QKLTRRCEVT AILVLFGLPR LLTGSILAHE LMHGWLRLKG YRNLKAEIEE
401: GICQVMSYLW LESEILPSTS RYGQASTSYA SSSSSSCRPP PSKKGGISHT EKKLGEFFLH QIANDTSSAY GDGFRAAYAA VNKYGLRQSL NHIRLTGGFP
501: V

Best Arabidopsis Sequence Match ( AT2G39830.1 )
(BLAST)

001: MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS NGGGSGAHTN HHPPQFQEDE NMVFPLPPSS LDDRSRGARD
101: KEELDRSISL SLADNTKRPH GYGWSMDNNR DFPRPFHGGL NPSSFIPPYE PSYQYRRRQR ICGGCNSDIG SGNYLGCMGT FFHPECFRCH SCGYAITEHE
201: FSLSGTKPYH KLCFKELTHP KCEVCHHFIP TNDAGLIEYR CHPFWNQKYC PSHEYDKTAR CCSCERLESW DVRYYTLEDG RSLCLECMET AITDTGECQP
301: LYHAIRDYYE GMYMKLDQQI PMLLVQREAL NDAIVGEKNG YHHMPETRGL CLSEEQTVTS VLRRPRLGAH RLVGMRTQPQ RLTRKCEVTA ILVLYGLPRL
401: LTGAILAHEL MHGWLRLNGF RNLNPEVEEG ICQVLSYMWL ESEVLSDPST RNLPSTSSVA TSSSSSFSNK KGGKSNVEKK LGEFFKHQIA HDASPAYGGG
501: FRAANAAACK YGLRRTLDHI RLTGTFPL

Arabidopsis Description

DAR2DA1-related protein 2 [Source:TAIR;Acc:AT2G39830]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.