Factsheet for HORVU4Hr1G060560.7

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G211600.2	Wheat	endoplasmic reticulum	96.27	95.89
TraesCS4A01G093500.1	Wheat	endoplasmic reticulum	96.07	95.69
TraesCS4B01G210900.3	Wheat	cytosol	94.3	88.89
KXG39715	Sorghum	endoplasmic reticulum	84.28	84.45
Os03t0267800-01	Rice	cytosol	81.73	83.03
Zm00001d028567_P001	Maize	mitochondrion	78.39	77.63
Zm00001d047837_P003	Maize	cytosol	71.71	71.15
GSMUA_Achr10P...	Banana	mitochondrion	64.44	69.49
GSMUA_Achr5P07030_001	Banana	cytosol	63.65	69.08
GSMUA_Achr8P19520_001	Banana	cytosol	60.12	64.42
PGSC0003DMT400069927	Potato	cytosol	55.6	63.17
KRG97826	Soybean	cytosol	52.85	61.14
VIT_13s0019g02430.t01	Wine grape	plastid	57.76	58.22
Solyc05g052910.2.1	Tomato	plastid	56.78	57.34
KRH15044	Soybean	cytosol	56.58	57.14
KRH31044	Soybean	nucleus	54.62	54.62
CDY07633	Canola	plastid	55.01	54.58
Bra000152.1-P	Field mustard	plastid	54.81	54.28
CDY61785	Canola	plastid	54.62	53.88
HORVU2Hr1G002700.14	Barley	cytosol	52.46	52.98
CDX74829	Canola	cytosol, plastid	54.42	52.56
HORVU0Hr1G028930.1	Barley	cytosol	16.31	52.53
AT2G39830.2	Thale cress	cytosol, plastid	54.62	52.35
CDY20486	Canola	cytosol, plastid	54.03	52.28
Solyc03g079910.2.1	Tomato	cytosol	55.99	51.91
KRH73095	Soybean	plastid	57.17	51.87
Bra005011.1-P	Field mustard	cytosol, plastid	50.69	51.5
PGSC0003DMT400055872	Potato	cytosol	53.05	51.23
HORVU7Hr1G118120.1	Barley	cytosol	4.32	51.16
HORVU5Hr1G016350.3	Barley	cytosol	47.15	49.18
HORVU4Hr1G011730.4	Barley	cytosol	47.74	41.75

Protein Annotations

EnsemblPlants:HORVU4Hr1G060560.7	EnsemblPlantsGene:HORVU4Hr1G060560	Gene3D:2.10.110.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
InterPro:DA1-like	InterPro:IPR001781	InterPro:Znf_LIM	PANTHER:PTHR24209	PANTHER:PTHR24209:SF21	PFAM:PF00412
PFAM:PF12315	PFscan:PS50023	ScanProsite:PS00478	SEG:seg	SMART:SM00132	SUPFAM:SSF57716
UniParc:UPI000B474AF5	UniProt:A0A287P9H1	MapMan:19.2.2.1.7	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:508475078..508479436

Molecular Weight (calculated)

58150.5 Da

IEP (calculated)

8.311

GRAVY (calculated)

-0.733

Length

509 amino acids

Sequence
(BLAST)

001: MAYHPSRAYN QCGGHERRSS FMKWLCNFLK GTKPVESNHR RRPRVTAGEE SSLWQHEPVR PKREDPPRHD NEELDRQIAL SLAEEAKRPK ERNHNKGEND
101: EDLAKAMQDS LNMNPYMPHN PYAPAPAPSQ ALPRGQRVCG GCKHEVGHGH YLSCMGMYWH PQCFRCSSCT HPIRETEFTL LGAEPYHKLC YKELHHPKCD
201: VCLQFIATNR TGLIEYRAHP FWGQKYCPSH ELDRTPRCCS CEKMEPRNTK YMSLGDGRSL CMECLDSAVM DTGECQPLYH SIRDYYEGMN MKLDQQIPML
301: LVERQALNEA MEGECKGPHH MPETRGLCLS EEQTVSSILR RPRIGGHRLL DMRTQPQKLT RRCEVTAILV LYGLPSRLLT GSILAHELMH GWLRLKGYRN
401: LSPEVEEGIC QVMSYLWLES EILPASTRHA QPSTSYASSS SSSSYRPPSS KKGGISHTEK KLGEFFMHQI ANDTSTAYGD GFRTAYKAVN KYGLRQTLNH
501: IRLTGGFPV

Best Arabidopsis Sequence Match ( AT2G39830.1 )
(BLAST)

001: MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS NGGGSGAHTN HHPPQFQEDE NMVFPLPPSS LDDRSRGARD
101: KEELDRSISL SLADNTKRPH GYGWSMDNNR DFPRPFHGGL NPSSFIPPYE PSYQYRRRQR ICGGCNSDIG SGNYLGCMGT FFHPECFRCH SCGYAITEHE
201: FSLSGTKPYH KLCFKELTHP KCEVCHHFIP TNDAGLIEYR CHPFWNQKYC PSHEYDKTAR CCSCERLESW DVRYYTLEDG RSLCLECMET AITDTGECQP
301: LYHAIRDYYE GMYMKLDQQI PMLLVQREAL NDAIVGEKNG YHHMPETRGL CLSEEQTVTS VLRRPRLGAH RLVGMRTQPQ RLTRKCEVTA ILVLYGLPRL
401: LTGAILAHEL MHGWLRLNGF RNLNPEVEEG ICQVLSYMWL ESEVLSDPST RNLPSTSSVA TSSSSSFSNK KGGKSNVEKK LGEFFKHQIA HDASPAYGGG
501: FRAANAAACK YGLRRTLDHI RLTGTFPL

Arabidopsis Description

DAR2DA1-related protein 2 [Source:TAIR;Acc:AT2G39830]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.