Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G016350.3 | Barley | cytosol | 75.32 | 24.39 |
| TraesCS5A01G060800.1 | Wheat | cytosol | 74.68 | 24.18 |
| TraesCS5D01G072300.1 | Wheat | nucleus | 74.68 | 24.18 |
| GSMUA_Achr7P00700_001 | Banana | endoplasmic reticulum | 65.19 | 23.09 |
| TraesCS5B01G071300.1 | Wheat | mitochondrion | 74.68 | 22.87 |
| Os12t0596800-01 | Rice | plasma membrane | 68.99 | 22.43 |
| EES16286 | Sorghum | cytosol | 68.99 | 21.46 |
| HORVU2Hr1G002700.14 | Barley | cytosol | 62.03 | 19.44 |
| GSMUA_Achr4P23130_001 | Banana | mitochondrion | 56.96 | 18.79 |
| HORVU4Hr1G060560.7 | Barley | cytosol | 52.53 | 16.31 |
| HORVU4Hr1G011730.4 | Barley | cytosol | 59.49 | 16.15 |
| Zm00001d030953_P001 | Maize | plastid | 42.41 | 11.94 |
| HORVU7Hr1G118120.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU0Hr1G028930.1 | EnsemblPlantsGene:HORVU0Hr1G028930 | InterPro:DA1-like | ncoils:Coil | PANTHER:PTHR24209 | PANTHER:PTHR24209:SF11 |
| PFAM:PF12315 | SEG:seg | UniParc:UPI000B46C703 | UniProt:A0A287E9S8 | MapMan:19.2.2.1.7 | : |
Description
No Description!
Coordinates
chrchrUn:+:154889751..154890904
Molecular Weight (calculated)
14214.5 Da
IEP (calculated)
6.098
GRAVY (calculated)
-0.215
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSPECQHLY MDIQEFFEGL NMKVEQQVPL LLVERQALNE ALEAEKSGHH LPETRGLCLS EEQIVKTILR RPTIGPGNRI MDMITGPYKL VRRCEVTAIL
101: ILYGLPRLQT GSILAHEMMX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXRNQNN
101: ILYGLPRLQT GSILAHEMMX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXRNQNN
001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV
Arabidopsis Description
DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.