Factsheet for GSMUA_Achr4P23130_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	67.85	72.87
GSMUA_Achr9P07650_001	Banana	cytosol	47.39	70.5
KRH33082	Soybean	cytosol	13.15	70.0
GSMUA_Achr6P28210_001	Banana	cytosol	67.85	68.13
VIT_18s0001g11820.t01	Wine grape	cytosol	64.3	64.3
VIT_04s0023g01030.t01	Wine grape	cytosol	63.67	62.5
PGSC0003DMT400043506	Potato	cytosol	61.17	60.29
Solyc04g079840.2.1	Tomato	cytosol	60.96	60.08
PGSC0003DMT400026022	Potato	cytosol	63.05	58.53
Solyc02g089930.2.1	Tomato	cytosol	62.63	58.25
Os12t0596800-01	Rice	plasma membrane	58.66	57.82
KRH15264	Soybean	cytosol	58.25	57.76
KRH05774	Soybean	cytosol	57.62	57.74
Os03t0626600-01	Rice	plasma membrane	58.66	57.23
HORVU0Hr1G028930.1	Barley	cytosol	18.79	56.96
HORVU5Hr1G016350.3	Barley	cytosol	57.83	56.76
TraesCS5A01G060800.1	Wheat	cytosol	57.2	56.15
TraesCS5D01G072300.1	Wheat	nucleus	57.2	56.15
KRH08326	Soybean	cytosol	62.0	56.14
Bra016514.1-P	Field mustard	cytosol	54.07	56.06
EES16286	Sorghum	cytosol	59.08	55.71
OQU91328	Sorghum	cytosol, mitochondrion	58.46	55.45
Zm00001d033289_P001	Maize	cytosol	11.9	55.34
CDY41035	Canola	cytosol, mitochondrion	58.04	54.83
Zm00001d033297_P003	Maize	cytosol, mitochondrion	57.41	54.67
CDY26685	Canola	cytosol, mitochondrion	57.83	54.64
KRH76891	Soybean	cytosol	62.21	54.58
GSMUA_Achr9P07640_001	Banana	cytosol	17.33	53.21
KRH28579	Soybean	cytosol	62.42	53.11
TraesCS5B01G071300.1	Wheat	mitochondrion	57.2	53.1
CDX96669	Canola	cytosol	56.58	53.03
AT4G36860.3	Thale cress	cytosol	63.88	53.03
Bra025725.1-P	Field mustard	cytosol, mitochondrion	57.83	52.56
CDX83776	Canola	cytosol	55.53	52.05
AT1G19270.1	Thale cress	cytosol, mitochondrion	57.41	51.69
KRH69970	Soybean	cytosol	61.8	51.39
GSMUA_Achr10P...	Banana	mitochondrion	50.52	51.27
GSMUA_Achr5P07030_001	Banana	cytosol	49.9	50.96
CDX75603	Canola	mitochondrion	62.42	50.51
CDX69251	Canola	mitochondrion, nucleus	62.42	50.08
TraesCS4A01G245200.2	Wheat	cytosol	56.16	49.91
Bra011712.1-P	Field mustard	cytosol, mitochondrion	62.0	49.67
TraesCS4B01G070200.1	Wheat	cytosol	56.16	49.36
TraesCS4D01G069000.1	Wheat	cytosol	56.37	49.09
VIT_04s0023g01040.t01	Wine grape	plasma membrane	59.08	48.71
GSMUA_Achr8P19520_001	Banana	cytosol	48.02	48.42
KRH26214	Soybean	cytosol	39.25	47.47
Solyc01g105210.2.1	Tomato	extracellular	11.69	46.28
CDY18615	Canola	cytosol	33.61	45.87
HORVU4Hr1G011730.4	Barley	cytosol	55.32	45.53
Bra037160.1-P	Field mustard	cytosol	36.74	45.13
Zm00001d030953_P001	Maize	plastid	52.19	44.56
CDX81385	Canola	cytosol	38.62	39.11
CDX81383	Canola	cytosol	36.74	36.9
PGSC0003DMT400032774	Potato	cytosol	21.71	36.49
CDY47008	Canola	cytosol, nucleus, peroxisome	34.03	35.59
CDY18616	Canola	nucleus	36.53	34.86
AT5G66640.5	Thale cress	nucleus	34.86	34.65
PGSC0003DMT400032779	Potato	cytosol	15.24	34.6
Solyc01g105200.2.1	Tomato	cytosol	11.69	34.57
CDX81381	Canola	cytosol	36.74	34.24
Bra037159.1-P	Field mustard	cytosol	35.91	33.33
CDX81382	Canola	cytosol	35.7	32.95
AT5G66610.2	Thale cress	cytosol	39.46	32.2
AT5G66620.1	Thale cress	cytosol	39.67	29.5
CDY45247	Canola	cytosol	37.16	28.85
Solyc01g105180.2.1	Tomato	cytosol	22.76	28.02
CDY54205	Canola	cytosol	36.74	27.54
CDY54206	Canola	cytosol	24.63	27.25
VIT_18s0041g02180.t01	Wine grape	mitochondrion	37.16	25.8
AT5G66630.1	Thale cress	cytosol	36.53	24.93
CDY54207	Canola	extracellular, plasma membrane	34.86	24.85
VIT_18s0041g02190.t01	Wine grape	cytosol	16.49	18.9

Protein Annotations

MapMan:19.2.2.1.7	Gene3D:2.10.110.10	InterPro:DA1-like	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr4G23130_001	EnsemblPlants:GSMUA_Achr4P23130_001	EnsemblPlants:GSMUA_Achr4T23130_001	InterPro:IPR001781	InterPro:IPR003903	UniProt:M0SRC4
PFAM:PF00412	PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023	PFscan:PS50330	PANTHER:PTHR24209
PANTHER:PTHR24209:SF12	SMART:SM00132	SMART:SM00726	SUPFAM:SSF57716	InterPro:UIM_dom	UniParc:UPI000295A1F1
InterPro:Znf_LIM	SEG:seg	:	:	:	:

Description

Protein DA1-related 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G23130_001]

Coordinates

chr4:-:23324774..23333172

Molecular Weight (calculated)

54365.1 Da

IEP (calculated)

7.802

GRAVY (calculated)

-0.517

Length

479 amino acids

Sequence
(BLAST)

001: MIWLNKLFKG SNLKFSAGQC HGRHADDGFW NKPSSSLGIQ REYDDEDIDQ ALALSLSEEE QKKGKTVDKS LLEEDEQLAK ALQESLNAEY PPRQNGQICQ
101: PNPFSFPSVS RRCAGCNKEV GRGQSLSTMG AVWHPECLRC HGCNKPITDY ELSLYENRPY HKSCYRKLYH PKCAVCKQYI PAIRDGHIEY RAHPFWGQRY
201: CPLHERDGTP MCCSCERMEP RDTKYVTLDD GRKLCLECLN FAIMDTSECQ PLYLGIKEFY EGLYMKVEQQ IPLLLVERQA LNEAMDGEMN VRQGHHRLPE
301: TRGLCLSEEK IVRTVLRRPI MGSGHRLTDM ITGPYRLIRR CDVTAILILY GLPRLLTGSI LAHEMMHAWL RLNGYGSLSL EVEEGICQVL AQMWLDSEIV
401: AGSASNVAST SSSSSTTRPS KKGARTQSER KLGECFKHEI EADASPVYGA GYRAATRAVN RYGLRRTLDH IKFTGSFPY

Best Arabidopsis Sequence Match ( AT4G36860.3 )
(BLAST)

001: MGWLTKILKG SSHKFSDGQC NGRYREDRNL EGPRYSAVSE LYCFLVHFEL KIKGFLEFLI QEGSDFDKEE IECAIALSLS EQEHVIPQDD KGKKIIEYKS
101: ETEEDDDDDE DEDEEYMRAQ LEAAEEEERR VAQAQIEEEE KRRAEAQLEE TEKLLAKARL EEEEMRRSKA QLEEDELLAK ALQESMNVGS PPRYDPGNIL
201: QPYPFLIPSS HRICVGCQAE IGHGRFLSCM GGVWHPECFC CNACDKPIID YEFSMSGNRP YHKLCYKEQH HPKCDVCHNF IPTNPAGLIE YRAHPFWMQK
301: YCPSHERDGT PRCCSCERME PKDTKYLILD DGRKLCLECL DSAIMDTHEC QPLYLEIREF YEGLHMKVEQ QIPMLLVERS ALNEAMEGEK HGHHHLPETR
401: GLCLSEEQTV TTVLRRPRIG AGYKLIDMIT EPCRLIRRCE VTAILILYGL PRLLTGSILA HEMMHAWLRL NGYPNLRPEV EEGICQVLAH MWLESETYAG
501: STLVDIASSS SSAVVSASSK KGERSDFEKK LGEFFKHQIE SDSSSAYGDG FRQGNQAVLK HGLRRTLDHI RLTGTFP

Arabidopsis Description

LIM domain-containing protein [Source:TAIR;Acc:AT4G36860]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.