CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69970	Soybean	cytosol	97.16	89.24
KRH33082	Soybean	cytosol	14.93	87.78
KRH26214	Soybean	cytosol	63.89	85.35
KRH76891	Soybean	cytosol	79.58	77.11
TraesCS2D01G016500.1	Wheat	cytosol	31.95	76.82
GSMUA_Achr9P07650_001	Banana	cytosol	46.5	76.4
KRH28579	Soybean	cytosol	78.07	73.36
VIT_04s0023g01030.t01	Wine grape	cytosol	67.3	72.95
GSMUA_Achr6P28210_001	Banana	cytosol	64.84	71.91
PGSC0003DMT400026022	Potato	cytosol	67.67	69.38
Solyc02g089930.2.1	Tomato	cytosol	67.3	69.13
Os06t0182500-02	Rice	cytosol	62.95	68.52
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	56.9	67.49
Zm00001d035844_P004	Maize	cytosol	62.38	64.96
TraesCS2B01G007700.1	Wheat	cytosol	61.81	64.88
TraesCS2D01G016900.1	Wheat	cytosol	61.63	64.68
TraesCSU01G007800.1	Wheat	cytosol	61.63	64.68
KXG19479	Sorghum	cytosol	62.38	64.45
KRH05774	Soybean	cytosol	57.09	63.18
KRH15264	Soybean	cytosol	56.9	62.32
GSMUA_Achr4P23130_001	Banana	mitochondrion	56.14	62.0
Os03t0626600-01	Rice	plasma membrane	57.47	61.91
Os12t0596800-01	Rice	plasma membrane	56.71	61.73
AT4G36860.3	Thale cress	cytosol	67.11	61.53
TraesCS5D01G072300.1	Wheat	nucleus	56.33	61.07
TraesCS5A01G060800.1	Wheat	cytosol	56.33	61.07
CDX75603	Canola	mitochondrion	67.49	60.3
OQU91328	Sorghum	cytosol, mitochondrion	57.28	60.0
CDX69251	Canola	mitochondrion, nucleus	67.67	59.97
Bra011712.1-P	Field mustard	cytosol, mitochondrion	67.67	59.87
EES16286	Sorghum	cytosol	57.09	59.45
Zm00001d033297_P003	Maize	cytosol, mitochondrion	55.58	58.45
TraesCS5B01G071300.1	Wheat	mitochondrion	56.33	57.75
KRG97826	Soybean	cytosol	46.12	55.45
VIT_04s0023g01040.t01	Wine grape	plasma membrane	60.49	55.08
Zm00001d033289_P001	Maize	cytosol	10.59	54.37
TraesCS4A01G245200.2	Wheat	cytosol	54.44	53.43
TraesCS4B01G070200.1	Wheat	cytosol	54.25	52.66
TraesCS4D01G069000.1	Wheat	cytosol	54.25	52.18
GSMUA_Achr9P07640_001	Banana	cytosol	15.12	51.28
KRH31044	Soybean	nucleus	48.2	50.1
KRH15044	Soybean	cytosol	47.64	50.0
Zm00001d030953_P001	Maize	plastid	50.66	47.77
KRH73095	Soybean	plastid	49.15	46.35

Protein Annotations

EntrezGene:100813890	MapMan:19.2.2.1.7	Gene3D:2.10.110.10	EMBL:ACUP02010161	InterPro:DA1-like	EnsemblPlantsGene:GLYMA_16G142700
GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	UniProt:I1MNJ2	InterPro:IPR001781	InterPro:IPR003903
EnsemblPlants:KRH08326	ProteinID:KRH08326	ProteinID:KRH08326.1	ProteinID:KRH08327.1	PFAM:PF00412	PFAM:PF12315
ScanProsite:PS00478	PFscan:PS50023	PFscan:PS50330	PANTHER:PTHR24209	PANTHER:PTHR24209:SF13	SMART:SM00132
SMART:SM00726	SUPFAM:SSF57716	InterPro:UIM_dom	UniParc:UPI000295CD04	InterPro:Znf_LIM	SEG:seg

Description

hypothetical protein

Coordinates

chr16:-:30141616..30148137

Molecular Weight (calculated)

59939.5 Da

IEP (calculated)

5.234

GRAVY (calculated)

-0.639

Length

529 amino acids

Sequence
(BLAST)

001: MGWFTKLLKG SNRKSSGGRY HGKYEDDRIS ENHDCSADDL MDIEKEEIDR AIALSLSEAD QKGKKVIEDD SESEDDELCP LSDEEAECVE VQQDEDDHHA
101: KIQQDEDKHL DEVQLEEDEQ LARAIQESLS ISSPPRSDSD SLFQPFAHLF PPVYRICAGC NSEIGHGRFL SCMGGYWHPE CFCCHACKLP ITDYEFSMSG
201: NRRYHKSCYK ELHHPRCDVC KKFIPPNSAG LIEYRAHPFW RQKYCPSHEG DGTPRCCSCQ RMESVDTKYL LLDDGRKLCL ECLDSAIMDT HECQPLYVEI
301: QEFYEGLHMK IEQQVPMLLV ERQALNEAME GEKNGHHHLP ETRGLCLSEE QTIPTILRRP RIGAGYQLID MITEPFRLVR RCEVTAILVL YGLPRLLTGS
401: ILAHEMMHAW LRLKGYGNLR PEVEEGICQV LAHMWLESEI IPGTGDEGAS SSSSSSSSSS SSSPSSSSSS KKGKRSDFEK KLGKYFKHQI ESDSSAAYGD
501: GFREGNQAVA KYGLRRTLDH IRLTGSFPY

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.