CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH76891	Soybean	cytosol	92.9	95.79
KRH33082	Soybean	cytosol	12.79	80.0
KRH08326	Soybean	cytosol	73.36	78.07
TraesCS2D01G016500.1	Wheat	cytosol	29.66	75.91
GSMUA_Achr9P07650_001	Banana	cytosol	43.16	75.47
VIT_04s0023g01030.t01	Wine grape	cytosol	63.77	73.57
GSMUA_Achr6P28210_001	Banana	cytosol	61.28	72.33
KRH69970	Soybean	cytosol	73.36	71.7
PGSC0003DMT400026022	Potato	cytosol	64.65	70.54
Solyc02g089930.2.1	Tomato	cytosol	64.3	70.29
Os06t0182500-02	Rice	cytosol	60.57	70.16
KRH26214	Soybean	cytosol	47.78	67.93
TraesCS2B01G007700.1	Wheat	cytosol	59.68	66.67
Zm00001d035844_P004	Maize	cytosol	60.04	66.54
TraesCSU01G007800.1	Wheat	cytosol	59.5	66.47
TraesCS2D01G016900.1	Wheat	cytosol	59.5	66.47
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	52.58	66.37
KXG19479	Sorghum	cytosol	60.21	66.21
KRH05774	Soybean	cytosol	54.53	64.23
KRH15264	Soybean	cytosol	54.0	62.94
GSMUA_Achr4P23130_001	Banana	mitochondrion	53.11	62.42
AT4G36860.3	Thale cress	cytosol	63.77	62.22
Os03t0626600-01	Rice	plasma membrane	54.17	62.12
Os12t0596800-01	Rice	plasma membrane	53.46	61.93
CDX75603	Canola	mitochondrion	64.48	61.32
Bra011712.1-P	Field mustard	cytosol, mitochondrion	65.01	61.2
CDX69251	Canola	mitochondrion, nucleus	64.83	61.14
OQU91328	Sorghum	cytosol, mitochondrion	54.35	60.59
TraesCS5D01G072300.1	Wheat	nucleus	52.22	60.25
TraesCS5A01G060800.1	Wheat	cytosol	52.22	60.25
EES16286	Sorghum	cytosol	54.17	60.04
Zm00001d033297_P003	Maize	cytosol, mitochondrion	53.11	59.44
Zm00001d033289_P001	Maize	cytosol	10.48	57.28
TraesCS5B01G071300.1	Wheat	mitochondrion	52.22	56.98
TraesCS4A01G245200.2	Wheat	cytosol	52.58	54.92
VIT_04s0023g01040.t01	Wine grape	plasma membrane	56.66	54.91
TraesCS4B01G070200.1	Wheat	cytosol	52.58	54.31
TraesCS4D01G069000.1	Wheat	cytosol	52.58	53.82
KRG97826	Soybean	cytosol	41.92	53.64
GSMUA_Achr9P07640_001	Banana	cytosol	14.74	53.21
KRH15044	Soybean	cytosol	44.58	49.8
Zm00001d030953_P001	Maize	plastid	48.31	48.48
KRH31044	Soybean	nucleus	43.52	48.13
KRH73095	Soybean	plastid	44.94	45.1

Protein Annotations

EntrezGene:100778105	MapMan:19.2.2.1.7	Gene3D:2.10.110.10	EMBL:ACUP02006757	ncoils:Coil	InterPro:DA1-like
EnsemblPlantsGene:GLYMA_11G062400	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR001781	InterPro:IPR003903
UniProt:K7LNC0	ProteinID:KRH28576.1	ProteinID:KRH28577.1	ProteinID:KRH28578.1	EnsemblPlants:KRH28579	ProteinID:KRH28579
ProteinID:KRH28579.1	ProteinID:KRH28580.1	ProteinID:KRH28581.1	ProteinID:KRH28582.1	ProteinID:KRH28583.1	ProteinID:KRH28584.1
PFAM:PF00412	PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023	PFscan:PS50330	PANTHER:PTHR24209
PANTHER:PTHR24209:SF12	SMART:SM00132	SMART:SM00726	SUPFAM:SSF57716	InterPro:UIM_dom	UniParc:UPI000233CE0A
InterPro:Znf_LIM	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:4720040..4726569

Molecular Weight (calculated)

64522.3 Da

IEP (calculated)

5.259

GRAVY (calculated)

-0.646

Length

563 amino acids

Sequence
(BLAST)

001: MGWFTKLLKG SDHKILRGQY HGKYGEDRIW DNHHSSMDDL TDIEKEDIDR AIALSLSEED HKGKKVVDEE LCKIDDDEED EHLVKVHLDE DERLAKIQQE
101: EEERLAKIQQ EDEHLAKIQQ EEEERLAKIQ QEDECLAKIQ QEDERLAKAQ LEEDEQLARA IQESLKIGSP PQYDNGSSIL SFPHLFPPGY RICAGCKTEI
201: GQGRFLSCMG GVWHPECFCC HACHLPITDY EFSMSSNRPY HKSCYREKHH PRCDVCKNFI PTNSSGLIEY RAHPFWLQKY CPSHELDGTS RCCSCERMEP
301: RDTKYLLLDD GRKLCLECLD SSIMDTHECQ PLYLEIQEFY EGLNMKLEQQ IPMLLVERQA LNEAMEGEKN GHHHLPETRG LCLSEEQTVT TISRRPRIAA
401: GYRAIDMITE PYRLIRCCEV TAILVLYGLP RLLTGSILAH EMMHAWLRLK GYPNLSPEVE EGICQVLAHM WLESELYSGF GNDGASSSTS SLSSSSPSSS
501: SVSTKKGKRS DFEKKLGDFF KHQIESDTSS AYGDGFRLGN QAMVKYGLKR TLDHIHMTGS FPY

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.