Factsheet for Zm00001d033297_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91328	Sorghum	cytosol, mitochondrion	94.63	94.26
Os03t0626600-01	Rice	plasma membrane	71.17	72.91
Zm00001d033289_P001	Maize	cytosol	14.12	68.93
KRH33082	Soybean	cytosol	11.93	66.67
TraesCS4A01G245200.2	Wheat	cytosol	69.98	65.31
TraesCS4B01G070200.1	Wheat	cytosol	70.18	64.77
TraesCS4D01G069000.1	Wheat	cytosol	70.18	64.18
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	55.47	62.56
VIT_04s0023g01030.t01	Wine grape	cytosol	59.84	61.68
VIT_18s0001g11820.t01	Wine grape	cytosol	57.65	60.54
HORVU4Hr1G011730.4	Barley	cytosol	69.98	60.48
Zm00001d035844_P004	Maize	cytosol	59.24	58.66
PGSC0003DMT400043506	Potato	cytosol	56.66	58.64
Solyc04g079840.2.1	Tomato	cytosol	56.46	58.44
GSMUA_Achr4P23130_001	Banana	mitochondrion	54.67	57.41
Solyc02g089930.2.1	Tomato	cytosol	57.46	56.12
PGSC0003DMT400026022	Potato	cytosol	57.26	55.81
KRH08326	Soybean	cytosol	58.45	55.58
KRH05774	Soybean	cytosol	52.49	55.23
KRH76891	Soybean	cytosol	59.64	54.95
KRH15264	Soybean	cytosol	52.49	54.66
Zm00001d030953_P001	Maize	plastid	60.64	54.37
Bra016514.1-P	Field mustard	cytosol	49.9	54.33
CDY41035	Canola	cytosol, mitochondrion	54.27	53.85
CDY26685	Canola	cytosol, mitochondrion	53.88	53.45
KRH28579	Soybean	cytosol	59.44	53.11
CDX83776	Canola	cytosol	53.08	52.25
CDX96669	Canola	cytosol	53.08	52.25
Bra025725.1-P	Field mustard	cytosol, mitochondrion	53.88	51.42
AT1G19270.1	Thale cress	cytosol, mitochondrion	54.08	51.13
AT4G36860.3	Thale cress	cytosol	57.85	50.43
KRH69970	Soybean	cytosol	57.65	50.35
CDX75603	Canola	mitochondrion	58.25	49.49
CDX69251	Canola	mitochondrion, nucleus	58.25	49.08
Bra011712.1-P	Field mustard	cytosol, mitochondrion	58.05	48.83
Solyc01g105210.2.1	Tomato	extracellular	11.73	48.76
VIT_04s0023g01040.t01	Wine grape	plasma membrane	54.47	47.16
Zm00001d028567_P001	Maize	mitochondrion	46.92	45.91
KRH26214	Soybean	cytosol	35.98	45.71
CDY18615	Canola	cytosol	31.01	44.44
Bra037160.1-P	Field mustard	cytosol	34.19	44.1
Zm00001d047837_P003	Maize	cytosol	42.15	41.33
CDX81383	Canola	cytosol	36.18	38.16
CDX81385	Canola	cytosol	35.39	37.63
PGSC0003DMT400032774	Potato	cytosol	21.27	37.54
PGSC0003DMT400032779	Potato	cytosol	14.91	35.55
CDY47008	Canola	cytosol, nucleus, peroxisome	32.21	35.37
Solyc01g105200.2.1	Tomato	cytosol	11.33	35.19
AT5G66640.5	Thale cress	nucleus	33.4	34.85
CDY18616	Canola	nucleus	33.4	33.47
CDX81381	Canola	cytosol	33.8	33.07
CDX81382	Canola	cytosol	33.6	32.56
Bra037159.1-P	Field mustard	cytosol	33.2	32.36
AT5G66610.2	Thale cress	cytosol	36.78	31.52
Solyc01g105180.2.1	Tomato	cytosol	23.26	30.08
CDY45247	Canola	cytosol	36.38	29.66
AT5G66620.1	Thale cress	cytosol	36.38	28.42
CDY54205	Canola	cytosol	35.98	28.33
CDY54206	Canola	cytosol	23.26	27.02
CDY54207	Canola	extracellular, plasma membrane	34.99	26.19
VIT_18s0041g02180.t01	Wine grape	mitochondrion	34.59	25.22
AT5G66630.1	Thale cress	cytosol	32.41	23.22
VIT_18s0041g02190.t01	Wine grape	cytosol	15.9	19.14

Protein Annotations

EntrezGene:103643720	MapMan:19.2.2.1.7	Gene3D:2.10.110.10	UniProt:A0A1D6KXJ5	InterPro:DA1-like	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	InterPro:IPR001781	InterPro:IPR003903	ProteinID:ONM07176.1	ProteinID:ONM07180.1
PFAM:PF00412	PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023	PFscan:PS50330	PANTHER:PTHR24209
PANTHER:PTHR24209:SF12	SMART:SM00132	SMART:SM00726	SUPFAM:SSF57716	InterPro:UIM_dom	UniParc:UPI0004DEAB64
EnsemblPlantsGene:Zm00001d033297	EnsemblPlants:Zm00001d033297_P003	EnsemblPlants:Zm00001d033297_T003	InterPro:Znf_LIM	SEG:seg	:

Description

LIM-transcription factor 5Protein DA1-related 1

Coordinates

chr1:-:258038209..258048304

Molecular Weight (calculated)

56772.2 Da

IEP (calculated)

6.099

GRAVY (calculated)

-0.534

Length

503 amino acids

Sequence
(BLAST)

001: MGWLSKIFKG PVNRVSRGHY NGNSHEGYSA QHTKSYGVHG NEDEDMDHAI ALSLSEEDQR KGKTIDTGHH LDEDEQIAQA LQENIGHNLA EDEQLARALQ
101: ESMNDGPPRQ HIPVEDVNSE STPASILPSN IFRTSGLRVC AGCRSPIGRG RFLSCMDSVW HPECFRCYAC DRPISEYEFA VHENHAYHRP CYKERFHPKC
201: DVCSSFIPTD KNGLIEYRAH PFWMQKYCPS HENDGTPRCC SCERMEPKDS QYITLDDGRR LCLECLHTAI METNECQPLY IDIQEFYEGM NMKVEQQVPL
301: LLVERQALNE AMEAEKSVHH LPETRGLCLS EEQIVRTILK GPIGPGNRII DMVTGPYKLI RRCEVTAILI LYGLPRLLTG SILAHEMMHA YLRLKGYRTL
401: SPEVEEGICQ VLAHLWLESE ITSGSGSMST TSDASSSSST SSSSKKGAKT EFEKRLGEFF KYQIETDSSV AYGDGFRAGM RAIERYGLRS TLDHIKMTGS
501: FPC

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.