Factsheet for Bra016514.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96669	Canola	cytosol	88.96	80.43
Bra025725.1-P	Field mustard	cytosol, mitochondrion	80.95	70.97
GSMUA_Achr9P07650_001	Banana	cytosol	48.48	69.57
TraesCS2D01G016500.1	Wheat	cytosol	33.12	69.55
AT1G19270.1	Thale cress	cytosol, mitochondrion	79.87	69.36
VIT_18s0001g11820.t01	Wine grape	cytosol	64.07	61.8
GSMUA_Achr6P28210_001	Banana	cytosol	63.64	61.64
PGSC0003DMT400043506	Potato	cytosol	63.2	60.08
Os06t0182500-02	Rice	cytosol	62.99	59.88
Solyc04g079840.2.1	Tomato	cytosol	62.99	59.88
KRH05774	Soybean	cytosol	61.69	59.62
KRH15264	Soybean	cytosol	61.04	58.39
TraesCS2B01G007700.1	Wheat	cytosol	62.55	57.34
TraesCS2D01G016900.1	Wheat	cytosol	62.12	56.94
TraesCSU01G007800.1	Wheat	cytosol	62.12	56.94
Zm00001d035844_P004	Maize	cytosol	62.55	56.89
KXG19479	Sorghum	cytosol	62.55	56.45
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	53.9	55.83
GSMUA_Achr4P23130_001	Banana	mitochondrion	56.06	54.07
Os12t0596800-01	Rice	plasma membrane	55.41	52.67
Os03t0626600-01	Rice	plasma membrane	55.19	51.93
Zm00001d033289_P001	Maize	cytosol	11.47	51.46
TraesCS5D01G072300.1	Wheat	nucleus	54.11	51.23
TraesCS5A01G060800.1	Wheat	cytosol	54.11	51.23
EES16286	Sorghum	cytosol	56.06	50.98
OQU91328	Sorghum	cytosol, mitochondrion	55.19	50.49
Zm00001d033297_P003	Maize	cytosol, mitochondrion	54.33	49.9
TraesCS5B01G071300.1	Wheat	mitochondrion	54.11	48.45
Bra011712.1-P	Field mustard	cytosol, mitochondrion	58.66	45.32
TraesCS4A01G245200.2	Wheat	cytosol	52.6	45.08
Bra037160.1-P	Field mustard	cytosol	37.88	44.87
TraesCS4D01G069000.1	Wheat	cytosol	52.6	44.18
TraesCS4B01G070200.1	Wheat	cytosol	51.95	44.04
Bra000152.1-P	Field mustard	plastid	48.92	43.97
Bra005011.1-P	Field mustard	cytosol, plastid	45.02	41.52
Zm00001d030953_P001	Maize	plastid	48.92	40.29
GSMUA_Achr9P07640_001	Banana	cytosol	12.99	38.46
Bra037159.1-P	Field mustard	cytosol	35.93	32.17
VIT_18s0041g02180.t01	Wine grape	mitochondrion	39.18	26.23
VIT_18s0041g02190.t01	Wine grape	cytosol	17.75	19.62

Protein Annotations

EnsemblPlants:Bra016514.1	EnsemblPlants:Bra016514.1-P	EnsemblPlantsGene:Bra016514	Gene3D:2.10.110.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:DA1-like	InterPro:IPR001781	InterPro:Znf_LIM	PANTHER:PTHR24209	PANTHER:PTHR24209:SF12
PFAM:PF00412	PFAM:PF12315	PFscan:PS50023	ScanProsite:PS00478	SEG:seg	SMART:SM00132
SUPFAM:SSF57716	UniParc:UPI0002546F21	UniProt:M4DJ36	MapMan:19.2.2.1.7	:	:

Description

AT1G19270 (E=3e-193) DA1 | DA1 (DA 1); ubiquitin binding

Coordinates

chrA08:-:18829094..18831336

Molecular Weight (calculated)

53236.7 Da

IEP (calculated)

6.803

GRAVY (calculated)

-0.671

Length

462 amino acids

Sequence
(BLAST)

001: MGWLNKIFKG SNQRHPMGNE HYHHNGGYYD NYPHEHSEPT DADHTQEPST SEEETWNGKE NEEVDRVIAL SILEEENQRP ETNTGAFSFS FLSTTCHYWH
101: RICAGCNMEI GHGRYLNCLN ALWHPQCFRC YGCSHPISEY EFSTSGNYPF HKACYRERFH PKCDVCSLFI STNHAGLIEY RAHPFWVQKY CPSHEHDATP
201: RCCSCERMEP RNTGYFELND GRKLCLECLD SSVMDTFQCQ PLYLQIQEFY EGLNMTVEQE VPLLLVERQA LNEAREGERN GHYHMPETRG LCLSEEQTVR
301: TVRKRSKGNW SGNMITEQFK LTRRCEVTAI LILFGLPRLL TGSILAHEMM HAWMRLKGFR PLSQDVEEGI CQVMAHKWLE AELAAGSRNS NAASSSSSSY
401: GGVKKGPRSQ YERKLGEFFK HQIEADASPV YGDGFRAGRL AVNKYGLRRT LEHIQMTGRF PV

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.