Factsheet for Bra025725.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 4
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26685	Canola	cytosol, mitochondrion	95.83	99.61
AT1G19270.1	Thale cress	cytosol, mitochondrion	88.42	87.59
Bra016514.1-P	Field mustard	cytosol	70.97	80.95
TraesCS2D01G016500.1	Wheat	cytosol	30.17	72.27
GSMUA_Achr9P07650_001	Banana	cytosol	43.45	71.12
VIT_18s0001g11820.t01	Wine grape	cytosol	62.81	69.1
GSMUA_Achr6P28210_001	Banana	cytosol	61.29	67.71
KRH05774	Soybean	cytosol	59.96	66.11
KRH15264	Soybean	cytosol	59.96	65.42
PGSC0003DMT400043506	Potato	cytosol	59.39	64.4
Os06t0182500-02	Rice	cytosol	59.39	64.4
Solyc04g079840.2.1	Tomato	cytosol	59.2	64.2
TraesCS2B01G007700.1	Wheat	cytosol	59.77	62.5
TraesCS2D01G016900.1	Wheat	cytosol	59.39	62.1
TraesCSU01G007800.1	Wheat	cytosol	59.2	61.9
Zm00001d035844_P004	Maize	cytosol	59.39	61.61
KXG19479	Sorghum	cytosol	59.39	61.13
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	51.23	60.54
GSMUA_Achr4P23130_001	Banana	mitochondrion	52.56	57.83
Os03t0626600-01	Rice	plasma membrane	51.04	54.79
Os12t0596800-01	Rice	plasma membrane	50.47	54.73
EES16286	Sorghum	cytosol	52.56	54.53
OQU91328	Sorghum	cytosol, mitochondrion	52.18	54.46
TraesCS5D01G072300.1	Wheat	nucleus	50.28	54.3
TraesCS5A01G060800.1	Wheat	cytosol	50.28	54.3
Zm00001d033297_P003	Maize	cytosol, mitochondrion	51.42	53.88
Zm00001d033289_P001	Maize	cytosol	10.44	53.4
TraesCS5B01G071300.1	Wheat	mitochondrion	50.28	51.36
Bra011712.1-P	Field mustard	cytosol, mitochondrion	54.84	48.33
GSMUA_Achr9P07640_001	Banana	cytosol	14.04	47.44
Bra037160.1-P	Field mustard	cytosol	34.91	47.18
TraesCS4A01G245200.2	Wheat	cytosol	48.2	47.12
TraesCS4B01G070200.1	Wheat	cytosol	48.01	46.42
TraesCS4D01G069000.1	Wheat	cytosol	48.39	46.36
Bra000152.1-P	Field mustard	plastid	44.02	45.14
Bra005011.1-P	Field mustard	cytosol, plastid	41.75	43.91
Zm00001d030953_P001	Maize	plastid	46.49	43.67
Bra037159.1-P	Field mustard	cytosol	33.4	34.11
VIT_18s0041g02180.t01	Wine grape	mitochondrion	34.91	26.67
VIT_18s0041g02190.t01	Wine grape	cytosol	17.27	21.77

Protein Annotations

MapMan:19.2.2.1.7	Gene3D:2.10.110.10	EnsemblPlantsGene:Bra025725	EnsemblPlants:Bra025725.1	EnsemblPlants:Bra025725.1-P	InterPro:DA1-like
GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR001781	InterPro:IPR003903	UniProt:M4EAB7
PFAM:PF00412	PFAM:PF02809	PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023	PFscan:PS50330
PANTHER:PTHR24209	PANTHER:PTHR24209:SF7	SMART:SM00132	SMART:SM00726	SUPFAM:SSF57716	InterPro:UIM_dom
UniParc:UPI000253F539	InterPro:Znf_LIM	SEG:seg	:	:	:

Description

AT1G19270 (E=7e-262) DA1 | DA1 (DA 1); ubiquitin binding

Coordinates

chrA06:+:7511471..7513748

Molecular Weight (calculated)

59686.0 Da

IEP (calculated)

6.297

GRAVY (calculated)

-0.670

Length

527 amino acids

Sequence
(BLAST)

001: MGWFNKIFKG STQRFRLGND HDHNGYYQSY PHDEPSADTD PDPDPDETHT QEPSTSEEDT SGQENEDIDR AIALSLIENS QGQTNNTCAG KYAMVDEDEQ
101: LARAIQESMV VGNTPRQKHG SSYDIGNAYG AGDVYGNGHM HGGGNVYANG DIYYPRPTAF PMDFRICAGC NMEIGHGRYL NCLNALWHPE CFRCYGCRHP
201: ISEYEFSTSG NYPFHKACYR ERYHPKCDVC SLFIPTNHAG LIEYRAHPFW VQKYCPSHEH DATPRCCSCE RMEPRNTGYV ELNDGRKLCL ECLDSAVMDT
301: FQCQPLYLQI QEFYEGLFMK VEQDVPLLLV ERQALNEARE GEKNGHYHMP ETRGLCLSEE QTVSTVRKRS KHGTGNWAGN MITEPYKLTR QCEVTAILIL
401: FGLPRLLTGS ILAHEMMHAW MRLKGFRTLS QDVEEGICQV MAHKWLEAEL AAGSRNSNVA SSSSSRGVKK GPRSQYERKL GEFFKHQIES DASPVYGDGF
501: RAGRLAVNKY GLPKTLEHIQ MTGRFPV

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.