Factsheet for Bra005011.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74829	Canola	cytosol, plastid	98.8	93.93
CDY20486	Canola	cytosol, plastid	97.6	92.97
AT2G39830.2	Thale cress	cytosol, plastid	91.22	86.06
Bra000152.1-P	Field mustard	plastid	88.22	85.99
VIT_13s0019g02430.t01	Wine grape	plastid	66.87	66.34
PGSC0003DMT400069927	Potato	cytosol	59.28	66.29
Solyc05g052910.2.1	Tomato	plastid	64.27	63.89
KRG97826	Soybean	cytosol	55.09	62.73
PGSC0003DMT400055872	Potato	cytosol	64.87	61.67
KRH15044	Soybean	cytosol	61.68	61.31
KRH31044	Soybean	nucleus	61.28	60.31
Solyc03g079910.2.1	Tomato	cytosol	64.47	58.83
GSMUA_Achr5P07030_001	Banana	cytosol	54.29	58.0
GSMUA_Achr10P...	Banana	mitochondrion	53.09	56.36
KRH73095	Soybean	plastid	61.68	55.08
GSMUA_Achr8P19520_001	Banana	cytosol	51.1	53.89
KXG39715	Sorghum	endoplasmic reticulum	52.69	51.97
Os03t0267800-01	Rice	cytosol	51.1	51.1
HORVU4Hr1G060560.7	Barley	cytosol	51.5	50.69
TraesCS4D01G211600.2	Wheat	endoplasmic reticulum	51.3	50.29
TraesCS4A01G093500.1	Wheat	endoplasmic reticulum	51.3	50.29
Zm00001d028567_P001	Maize	mitochondrion	50.9	49.61
TraesCS4B01G210900.3	Wheat	cytosol	51.3	47.59
Zm00001d047837_P003	Maize	cytosol	47.31	46.2
Bra016514.1-P	Field mustard	cytosol	41.52	45.02
Bra025725.1-P	Field mustard	cytosol, mitochondrion	43.91	41.75
Bra037160.1-P	Field mustard	cytosol	30.34	38.97
Bra011712.1-P	Field mustard	cytosol, mitochondrion	45.91	38.46
Bra037159.1-P	Field mustard	cytosol	29.34	28.49

Protein Annotations

EnsemblPlants:Bra005011.1	EnsemblPlants:Bra005011.1-P	EnsemblPlantsGene:Bra005011	Gene3D:2.10.110.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:DA1-like	InterPro:IPR001781	InterPro:Znf_LIM	PANTHER:PTHR24209	PANTHER:PTHR24209:SF22
PFAM:PF00412	PFAM:PF12315	PFscan:PS50023	ScanProsite:PS00478	SEG:seg	SMART:SM00132
UniParc:UPI00025473DC	UniProt:M4CLC4	MapMan:19.2.2.1.7	:	:	:

Description

AT2G39830 (E=7e-158) DAR2 | DAR2 (DA1-RELATED PROTEIN 2); zinc ion binding

Coordinates

chrA05:+:2957427..2961349

Molecular Weight (calculated)

56319.4 Da

IEP (calculated)

7.971

GRAVY (calculated)

-0.625

Length

501 amino acids

Sequence
(BLAST)

001: MDSSSSSSSS SSYGVAHVSH ISNPCIFGEA GSSSSSTYRD KKWNLMKWVS KLFKSGSSGG GGGGGARTNH HPPQFQEDEN MVFPLHPSSL DDRSRGARDK
101: EELDRAMSRS LADDRRRPHG YGWSMDNNSD FPRPFHGGLN PSSFIPPYEP SYQFRRRQRI CGGCNRDIGM GNYLGCMGTF FHPECFCCHS CRYPITEHEI
201: PTNDAGLIEY RCHPFWNQKY CPSHEYDKTG RCCSCERLES WDVRYYTLED GRSLCLECME TAITDTGDCQ PLYHSIRDYY EGMYMKLEQQ IPMLLVQREA
301: LNDAIVGEKN GYHHMPETRG LCLSEEQTVT SVLKRPRLGA HRLVGMRTQP RKLTRKCEVT AILVLYGLPR LLTGAILAHE LMHGWLRLKG YRNLNPEVEE
401: GICQVLSYMW LESEVLSDPL SRNVPSTSSS GATSSSSSSF SNKKGGKSNV EKKLGEFFKH QIAHDASPAY GGGFRAANAA VSKYGLHRTL DHIRYTGTFP
501: L

Best Arabidopsis Sequence Match ( AT2G39830.1 )
(BLAST)

001: MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS NGGGSGAHTN HHPPQFQEDE NMVFPLPPSS LDDRSRGARD
101: KEELDRSISL SLADNTKRPH GYGWSMDNNR DFPRPFHGGL NPSSFIPPYE PSYQYRRRQR ICGGCNSDIG SGNYLGCMGT FFHPECFRCH SCGYAITEHE
201: FSLSGTKPYH KLCFKELTHP KCEVCHHFIP TNDAGLIEYR CHPFWNQKYC PSHEYDKTAR CCSCERLESW DVRYYTLEDG RSLCLECMET AITDTGECQP
301: LYHAIRDYYE GMYMKLDQQI PMLLVQREAL NDAIVGEKNG YHHMPETRGL CLSEEQTVTS VLRRPRLGAH RLVGMRTQPQ RLTRKCEVTA ILVLYGLPRL
401: LTGAILAHEL MHGWLRLNGF RNLNPEVEEG ICQVLSYMWL ESEVLSDPST RNLPSTSSVA TSSSSSFSNK KGGKSNVEKK LGEFFKHQIA HDASPAYGGG
501: FRAANAAACK YGLRRTLDHI RLTGTFPL

Arabidopsis Description

DAR2DA1-related protein 2 [Source:TAIR;Acc:AT2G39830]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.