Factsheet for GSMUA_Achr10P02350_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P19520_001	Banana	cytosol	84.11	83.58
GSMUA_Achr5P07030_001	Banana	cytosol	82.42	82.94
PGSC0003DMT400069927	Potato	cytosol	63.14	66.52
HORVU4Hr1G060560.7	Barley	cytosol	69.49	64.44
GSMUA_Achr9P07650_001	Banana	cytosol	43.86	64.29
TraesCS4D01G211600.2	Wheat	endoplasmic reticulum	69.49	64.19
KXG39715	Sorghum	endoplasmic reticulum	69.07	64.17
TraesCS4A01G093500.1	Wheat	endoplasmic reticulum	69.28	63.99
Os03t0267800-01	Rice	cytosol	67.58	63.67
KRG97826	Soybean	cytosol	57.42	61.59
Zm00001d028567_P001	Maize	mitochondrion	66.74	61.28
VIT_13s0019g02430.t01	Wine grape	plastid	65.04	60.79
Solyc05g052910.2.1	Tomato	plastid	64.83	60.71
TraesCS4B01G210900.3	Wheat	cytosol	69.07	60.37
KRH15044	Soybean	cytosol	63.98	59.92
GSMUA_Achr6P28210_001	Banana	cytosol	58.9	58.28
CDY07633	Canola	plastid	61.65	56.73
Bra000152.1-P	Field mustard	plastid	61.65	56.61
CDY61785	Canola	plastid	61.44	56.2
Solyc03g079910.2.1	Tomato	cytosol	65.04	55.92
KRH31044	Soybean	nucleus	60.17	55.8
PGSC0003DMT400055872	Potato	cytosol	61.02	54.65
CDX74829	Canola	cytosol, plastid	61.02	54.65
CDY20486	Canola	cytosol, plastid	60.81	54.56
Zm00001d047837_P003	Maize	cytosol	58.69	54.0
KRH73095	Soybean	plastid	63.98	53.83
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	50.85	53.81
AT2G39830.2	Thale cress	cytosol, plastid	60.17	53.48
Bra005011.1-P	Field mustard	cytosol, plastid	56.36	53.09
GSMUA_Achr4P23130_001	Banana	mitochondrion	51.27	50.52
GSMUA_Achr9P07640_001	Banana	cytosol	11.44	34.62

Protein Annotations

EnsemblPlants:GSMUA_Achr10P02350_001	EnsemblPlants:GSMUA_Achr10T02350_001	EnsemblPlantsGene:GSMUA_Achr10G02350_001	Gene3D:2.10.110.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:DA1-like	InterPro:IPR001781	InterPro:Znf_LIM	PANTHER:PTHR24209	PANTHER:PTHR24209:SF21
PFAM:PF00412	PFAM:PF12315	PFscan:PS50023	ScanProsite:PS00478	SEG:seg	SMART:SM00132
SUPFAM:SSF57716	UniParc:UPI000296A8AD	UniProt:M0RER2	MapMan:19.2.2.1.7	:	:

Description

Protein DA1-related 2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G02350_001]

Coordinates

chr10:-:7016769..7021074

Molecular Weight (calculated)

53533.9 Da

IEP (calculated)

7.362

GRAVY (calculated)

-0.541

Length

472 amino acids

Sequence
(BLAST)

001: MRWLCKFFKG TGCRVSNGRH SHLIGGESML HRPVKPADDQ SKDANEDLDH ANALSLVEDA KKPNAPGYRG QGIDDDELAK AIQESLSMPS YQPYQPVQFL
101: PRGYRICGGC HHEIGYGHYL SCMGTFWHPQ CFRCYACGQL IRETEFSLSG TYPYHKSCYK ELHHPKCDVC HEFIPTNRAG LIEYRAHPFW GQKYCPSHEH
201: DHTPRCCSCE RMESRNTRYI YLGEGRSLCL ECLESAIMDA GDCQPLYHSI RDYYEGMNMR IDQQIPMLLV ERQALNEAME GEKYGHHHMP ETRGLCLSEE
301: QTVSSIHKRP RIGGNKILDM RTHPQKLIRR CEVTAILVLY GLPRLLTGSI LAHELMHGWL RLKGYRDLSP EVEEGICQVL SHMWLESEIM PGSTSVPSSS
401: SYAPSSSSAM PSSKKAAKSD TEKKLGEFFM HQIAHDTSTA YGEGFRAANA AVNKYGLRRT LDHIHFTGAF PV

Best Arabidopsis Sequence Match ( AT2G39830.1 )
(BLAST)

001: MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS NGGGSGAHTN HHPPQFQEDE NMVFPLPPSS LDDRSRGARD
101: KEELDRSISL SLADNTKRPH GYGWSMDNNR DFPRPFHGGL NPSSFIPPYE PSYQYRRRQR ICGGCNSDIG SGNYLGCMGT FFHPECFRCH SCGYAITEHE
201: FSLSGTKPYH KLCFKELTHP KCEVCHHFIP TNDAGLIEYR CHPFWNQKYC PSHEYDKTAR CCSCERLESW DVRYYTLEDG RSLCLECMET AITDTGECQP
301: LYHAIRDYYE GMYMKLDQQI PMLLVQREAL NDAIVGEKNG YHHMPETRGL CLSEEQTVTS VLRRPRLGAH RLVGMRTQPQ RLTRKCEVTA ILVLYGLPRL
401: LTGAILAHEL MHGWLRLNGF RNLNPEVEEG ICQVLSYMWL ESEVLSDPST RNLPSTSSVA TSSSSSFSNK KGGKSNVEKK LGEFFKHQIA HDASPAYGGG
501: FRAANAAACK YGLRRTLDHI RLTGTFPL

Arabidopsis Description

DAR2DA1-related protein 2 [Source:TAIR;Acc:AT2G39830]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.