Factsheet for Zm00001d047837_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG39715	Sorghum	endoplasmic reticulum	80.51	81.3
Zm00001d028567_P001	Maize	mitochondrion	73.49	73.35
Os03t0267800-01	Rice	cytosol	70.57	72.26
TraesCS4D01G211600.2	Wheat	endoplasmic reticulum	71.54	71.82
HORVU4Hr1G060560.7	Barley	cytosol	71.15	71.71
TraesCS4A01G093500.1	Wheat	endoplasmic reticulum	71.34	71.62
TraesCS4B01G210900.3	Wheat	cytosol	69.98	66.48
GSMUA_Achr10P...	Banana	mitochondrion	54.0	58.69
GSMUA_Achr5P07030_001	Banana	cytosol	53.22	58.21
PGSC0003DMT400069927	Potato	cytosol	47.17	54.02
GSMUA_Achr8P19520_001	Banana	cytosol	49.9	53.89
Zm00001d033289_P001	Maize	cytosol	10.53	52.43
KRG97826	Soybean	cytosol	43.08	50.23
VIT_13s0019g02430.t01	Wine grape	plastid	49.32	50.1
Solyc05g052910.2.1	Tomato	plastid	48.73	49.6
KRH15044	Soybean	cytosol	47.17	48.02
PGSC0003DMT400055872	Potato	cytosol	48.73	47.44
Bra005011.1-P	Field mustard	cytosol, plastid	46.2	47.31
CDY07633	Canola	plastid	47.17	47.17
Bra000152.1-P	Field mustard	plastid	46.98	46.89
CDY61785	Canola	plastid	46.39	46.12
KRH31044	Soybean	nucleus	45.61	45.97
Solyc03g079910.2.1	Tomato	cytosol	48.54	45.36
CDX74829	Canola	cytosol, plastid	46.39	45.16
Zm00001d035844_P004	Maize	cytosol	44.64	45.08
CDY20486	Canola	cytosol, plastid	46.0	44.87
AT2G39830.2	Thale cress	cytosol, plastid	46.0	44.44
KRH73095	Soybean	plastid	47.76	43.67
Zm00001d033297_P003	Maize	cytosol, mitochondrion	41.33	42.15
Zm00001d030953_P001	Maize	plastid	36.65	33.51

Protein Annotations

EnsemblPlants:Zm00001d047837_P003	EnsemblPlants:Zm00001d047837_T003	EnsemblPlantsGene:Zm00001d047837	Gene3D:2.10.110.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:DA1-like	InterPro:IPR001781	InterPro:Znf_LIM	PANTHER:PTHR24209	PANTHER:PTHR24209:SF21
PFAM:PF00412	PFAM:PF12315	PFscan:PS50023	ProteinID:AQL07759.1	ScanProsite:PS00478	SEG:seg
SMART:SM00132	SUPFAM:SSF57716	UniParc:UPI000842A41D	UniProt:A0A1D6PDX4	MapMan:19.2.2.1.7	:

Description

LIM-transcription factor 13Protein DA1-related 2

Coordinates

chr9:+:142882570..142887070

Molecular Weight (calculated)

57816.0 Da

IEP (calculated)

8.015

GRAVY (calculated)

-0.624

Length

513 amino acids

Sequence
(BLAST)

001: MAYSSRTCGR CNNHERRSGF MKWLCNFLKG PKPGEPNRRR PQVTAGEEED ALWHQRPVRP KNDPPRNDNE EVDRAIAESL TEDVRTPKEK TRKGDKDDED
101: LARAIQDSLN MNPYTPYNPY APSHAQPRGH RLCAGCKHEI GHGHYLSCMG IYWHPQCFRC NSCGHPIRET EACKLLPLPP FQVTVLVSEM VIPVLVSSCS
201: PVHIAEYRSI PQAVLQGAAP SEMRRLPSVY SNEQEWPDRV QSPPVLGPEP RNTKYMSLGD GRSLCMECLG SAVMDTGECQ PLYHSIRDYY EGMNMKLDQQ
301: IPMLLVERQA LNEAMEGESR GPHHMPETRG LCLSEEQTVS SILRRPRIGG NRLLDMRTQP QKLTRRCEVT AILVLYGLPR LLTGSILAHE LMHGWLRLKG
401: YRNLNAEVEE GICQVMSYLW LESEILPSSS RHAQPSSSYA SSSSSSYSYP PTSSKKGGIS HTEKKLGEFF MHQIAHDTST AYGDGFRTAY AAVNKYGLRQ
501: TLNHIRLTGG LPV

Best Arabidopsis Sequence Match ( AT2G39830.1 )
(BLAST)

001: MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS NGGGSGAHTN HHPPQFQEDE NMVFPLPPSS LDDRSRGARD
101: KEELDRSISL SLADNTKRPH GYGWSMDNNR DFPRPFHGGL NPSSFIPPYE PSYQYRRRQR ICGGCNSDIG SGNYLGCMGT FFHPECFRCH SCGYAITEHE
201: FSLSGTKPYH KLCFKELTHP KCEVCHHFIP TNDAGLIEYR CHPFWNQKYC PSHEYDKTAR CCSCERLESW DVRYYTLEDG RSLCLECMET AITDTGECQP
301: LYHAIRDYYE GMYMKLDQQI PMLLVQREAL NDAIVGEKNG YHHMPETRGL CLSEEQTVTS VLRRPRLGAH RLVGMRTQPQ RLTRKCEVTA ILVLYGLPRL
401: LTGAILAHEL MHGWLRLNGF RNLNPEVEEG ICQVLSYMWL ESEVLSDPST RNLPSTSSVA TSSSSSFSNK KGGKSNVEKK LGEFFKHQIA HDASPAYGGG
501: FRAANAAACK YGLRRTLDHI RLTGTFPL

Arabidopsis Description

DAR2DA1-related protein 2 [Source:TAIR;Acc:AT2G39830]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.