Factsheet for Zm00001d035844_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19479	Sorghum	cytosol	96.26	95.51
Os06t0182500-02	Rice	cytosol	86.02	89.92
TraesCS2D01G016500.1	Wheat	cytosol	38.78	89.55
HORVU2Hr1G002700.14	Barley	cytosol	84.84	85.52
TraesCS2D01G016900.1	Wheat	cytosol	84.65	85.32
TraesCS2B01G007700.1	Wheat	cytosol	84.65	85.32
TraesCSU01G007800.1	Wheat	cytosol	84.45	85.12
GSMUA_Achr9P07650_001	Banana	cytosol	51.77	81.68
GSMUA_Achr6P28210_001	Banana	cytosol	75.79	80.71
VIT_18s0001g11820.t01	Wine grape	cytosol	69.69	73.9
KRH33082	Soybean	cytosol	12.99	73.33
VIT_04s0023g01030.t01	Wine grape	cytosol	68.31	71.11
Solyc04g079840.2.1	Tomato	cytosol	66.73	69.75
PGSC0003DMT400043506	Potato	cytosol	66.34	69.34
Solyc02g089930.2.1	Tomato	cytosol	68.9	67.96
PGSC0003DMT400026022	Potato	cytosol	68.7	67.64
GSMUA_Achr9P07640_001	Banana	cytosol	20.08	65.38
KRH05774	Soybean	cytosol	61.22	65.06
KRH15264	Soybean	cytosol	61.22	64.39
Bra016514.1-P	Field mustard	cytosol	56.89	62.55
KRH08326	Soybean	cytosol	64.96	62.38
CDY41035	Canola	cytosol, mitochondrion	61.61	61.74
CDY26685	Canola	cytosol, mitochondrion	61.42	61.54
KRH76891	Soybean	cytosol	65.94	61.36
KRH28579	Soybean	cytosol	66.54	60.04
CDX83776	Canola	cytosol	60.24	59.88
CDX96669	Canola	cytosol	60.04	59.69
Bra025725.1-P	Field mustard	cytosol, mitochondrion	61.61	59.39
Zm00001d033297_P003	Maize	cytosol, mitochondrion	58.66	59.24
Zm00001d033289_P001	Maize	cytosol	12.01	59.22
AT1G19270.1	Thale cress	cytosol, mitochondrion	61.61	58.83
AT4G36860.3	Thale cress	cytosol	66.54	58.58
CDX75603	Canola	mitochondrion	66.54	57.09
KRH69970	Soybean	cytosol	64.57	56.94
CDX69251	Canola	mitochondrion, nucleus	66.73	56.78
Bra011712.1-P	Field mustard	cytosol, mitochondrion	66.73	56.69
VIT_04s0023g01040.t01	Wine grape	plasma membrane	62.2	54.39
KRH26214	Soybean	cytosol	40.16	51.52
Zm00001d028567_P001	Maize	mitochondrion	50.79	50.19
CDY18615	Canola	cytosol	34.65	50.14
Bra037160.1-P	Field mustard	cytosol	37.2	48.46
Zm00001d030953_P001	Maize	plastid	53.15	48.13
Solyc01g105210.2.1	Tomato	extracellular	11.02	46.28
Zm00001d047837_P003	Maize	cytosol	45.08	44.64
CDX81385	Canola	cytosol	39.37	42.28
CDX81383	Canola	cytosol	37.4	39.83
Solyc01g105200.2.1	Tomato	cytosol	12.01	37.65
AT5G66640.5	Thale cress	nucleus	35.43	37.34
PGSC0003DMT400032779	Potato	cytosol	15.16	36.49
CDY18616	Canola	nucleus	36.02	36.45
CDY47008	Canola	cytosol, nucleus, peroxisome	32.68	36.24
PGSC0003DMT400032774	Potato	cytosol	20.08	35.79
CDX81381	Canola	cytosol	35.43	35.02
CDX81382	Canola	cytosol	35.24	34.49
Bra037159.1-P	Field mustard	cytosol	33.66	33.14
AT5G66610.2	Thale cress	cytosol	38.19	33.05
AT5G66620.1	Thale cress	cytosol	40.16	31.68
CDY45247	Canola	cytosol	37.6	30.96
CDY54205	Canola	cytosol	37.99	30.2
Solyc01g105180.2.1	Tomato	cytosol	22.05	28.79
VIT_18s0041g02180.t01	Wine grape	mitochondrion	37.99	27.97
CDY54206	Canola	cytosol	23.62	27.71
CDY54207	Canola	extracellular, plasma membrane	35.83	27.08
AT5G66630.1	Thale cress	cytosol	33.46	24.22
VIT_18s0041g02190.t01	Wine grape	cytosol	18.11	22.01

Protein Annotations

EntrezGene:100191921	MapMan:19.2.2.1.7	Gene3D:2.10.110.10	ProteinID:AQK79756.1	ProteinID:AQK79769.1	ProteinID:AQK79770.1
ProteinID:AQK79772.1	UniProt:B4FAN8	EMBL:BT034176	EMBL:BT085014	ncoils:Coil	InterPro:DA1-like
GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR001781	InterPro:IPR003903	EMBL:KJ727468
PFAM:PF00412	PFAM:PF02809	PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023	PFscan:PS50330
PANTHER:PTHR24209	PANTHER:PTHR24209:SF11	SMART:SM00132	SMART:SM00726	SUPFAM:SSF57716	InterPro:UIM_dom
UniParc:UPI00017B612D	EnsemblPlantsGene:Zm00001d035844	EnsemblPlants:Zm00001d035844_P004	EnsemblPlants:Zm00001d035844_T004	InterPro:Znf_LIM	SEG:seg

Description

ubiquitin receptor1 ubiquitin receptor1

Coordinates

chr6:+:55321293..55329245

Molecular Weight (calculated)

57528.1 Da

IEP (calculated)

6.367

GRAVY (calculated)

-0.572

Length

508 amino acids

Sequence
(BLAST)

001: MGWLTKFFRG STHNISEEQY HSRPAEDTAW NEPSSSPVVT DILSEFNNED IDRAIALSLS EEEQRKEKAI DKDMHLEEDE QLARAIQESL NVESPPRRNG
101: SANGGTMYHP PRETGNAYQP PRENGSANGG NAYHPLPFMF SSGFRACAGC HREIGHGRFL SCMGAVWHPE CFRCHACSQP IYDYEFSMSG NHPYHKTCYK
201: EQFHPKCDVC KQFIPTNMNG LIEYRAHPFW VQKYCPSHEM DGTPRCCSCE RMEPRESKYV LLDDGRKLCL ECLDSAVMDT NDCQPLYLEI QEFYEGLNMK
301: VEQQVPLLLV ERQALNEAME GEKAGHHHLP ETRGLCLSEE QTVSTILRPR MAGNKIMGMI TEPYRLTRRC EVTAILILYG LPRLLTGSIL AHEMMHAWLR
401: LKGYRTLSPD VEEGICQVLA HMWIESEIMA GSGSSAASSS SGSSSSTSSK KGGRSQFEHR LGDFFKHQIE TDTSMAYGDG FRTGNRAVLH YGLKRTLEHI
501: RLTGTFPF

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.