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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • extracellular 1
  • cytosol 2
  • plastid 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400032779 Potato cytosol 46.27 85.31
Solyc01g105210.2.1 Tomato extracellular 24.42 78.51
Solyc01g105200.2.1 Tomato cytosol 23.65 56.79
GSMUA_Achr9P07650_001 Banana cytosol 27.76 33.54
TraesCS2D01G016500.1 Wheat cytosol 18.25 32.27
GSMUA_Achr6P28210_001 Banana cytosol 29.82 24.32
GSMUA_Achr7P00700_001 Banana endoplasmic reticulum 27.76 24.22
Bra037160.1-P Field mustard cytosol 23.65 23.59
Os06t0182500-02 Rice cytosol 29.31 23.46
OQU91328 Sorghum cytosol, mitochondrion 30.33 23.37
Zm00001d033297_P003 Maize cytosol, mitochondrion 30.08 23.26
Solyc04g079840.2.1 Tomato cytosol 29.05 23.25
Os12t0596800-01 Rice plasma membrane 28.79 23.05
GSMUA_Achr4P23130_001 Banana mitochondrion 28.02 22.76
Os03t0626600-01 Rice plasma membrane 28.53 22.61
TraesCS5D01G072300.1 Wheat nucleus 28.28 22.54
TraesCS5A01G060800.1 Wheat cytosol 28.28 22.54
TraesCS2B01G007700.1 Wheat cytosol 29.05 22.42
EES16286 Sorghum cytosol 29.05 22.24
TraesCSU01G007800.1 Wheat cytosol 28.79 22.22
CDY18615 Canola cytosol 20.05 22.22
TraesCS2D01G016900.1 Wheat cytosol 28.79 22.22
Zm00001d035844_P004 Maize cytosol 28.79 22.05
TraesCS4A01G245200.2 Wheat cytosol 30.33 21.89
KXG19479 Sorghum cytosol 28.79 21.88
TraesCS4D01G069000.1 Wheat cytosol 30.33 21.45
Solyc02g089930.2.1 Tomato cytosol 28.28 21.36
TraesCS5B01G071300.1 Wheat mitochondrion 28.28 21.32
TraesCS4B01G070200.1 Wheat cytosol 29.82 21.28
Zm00001d033289_P001 Maize cytosol 5.4 20.39
Solyc05g052910.2.1 Tomato plastid 26.22 20.24
CDX81383 Canola cytosol 24.68 20.13
CDX81385 Canola cytosol 23.65 19.45
Zm00001d030953_P001 Maize plastid 26.74 18.54
Solyc03g079910.2.1 Tomato cytosol 25.96 18.4
CDY18616 Canola nucleus 23.65 18.33
AT5G66640.5 Thale cress nucleus 22.11 17.84
CDX81381 Canola cytosol 22.62 17.12
Bra037159.1-P Field mustard cytosol 22.62 17.05
CDY47008 Canola cytosol, nucleus, peroxisome 20.05 17.03
AT5G66610.2 Thale cress cytosol 25.19 16.7
CDY45247 Canola cytosol 25.71 16.21
CDY54207 Canola extracellular, plasma membrane 27.25 15.77
CDY54205 Canola cytosol 25.71 15.65
AT5G66620.1 Thale cress cytosol 25.45 15.37
CDX81382 Canola cytosol 20.31 15.22
AT5G66630.1 Thale cress cytosol 25.96 14.39
CDY54206 Canola cytosol 14.4 12.93
GSMUA_Achr9P07640_001 Banana cytosol 1.54 3.85
HORVU7Hr1G118120.1 Barley cytosol 0.26 2.33
Protein Annotations
EnsemblPlants:Solyc01g105180.2.1EnsemblPlantsGene:Solyc01g105180.2InterPro:DA1-likePANTHER:PTHR24209PANTHER:PTHR24209:SF13PFAM:PF12315
SEG:segUniParc:UPI0002768D8AUniProt:K4B288MapMan:19.2.2.1.7::
Description
No Description!
Coordinates
chr1:+:93450683..93455575
Molecular Weight (calculated)
45000.8 Da
IEP (calculated)
6.926
GRAVY (calculated)
-0.494
Length
389 amino acids
Sequence
(BLAST)
001: MSANGFLLEG PSYQDQFSEY EDEDVVRAIG LSLQESNGKD IYIDNLECHQ NDEVEILAEK LEESTLSSAD LSTSTEGSEL KWWKLFKEFN PSVHTSKGTS
101: WWRKSSKRCN TLLCDVCEEQ ISSEWLRCTY WGQTVRKKHI SDGTPCCCAC SRFKIGDIRY ITLSDGRQLC PDCHYTAVMD PEDCKPLLDE VHRFFKGLNM
201: KIRYYIPILL VDQEEIIRIH KKSILGSTIY EKFELEAVNY VSKSIQRGEN VEVVKEVEQL PPGRKVRAVL LLYGFPKLAI GSTLAHELMH AWMRVQGYRG
301: LSLNIAEGLS QVMAHKWLEW QSFTGHDYMK GTSEKAQFLR NLKEFMKDGI ERRYSEAYGH GFREAKWAVE RYGLRYTLKH IARKGKLPE
Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)
001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV
Arabidopsis Description
DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.