CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18615	Canola	cytosol	41.23	60.97
CDY18616	Canola	nucleus	57.23	59.16
CDX81381	Canola	cytosol	55.49	56.03
CDX81385	Canola	cytosol	43.55	47.78
AT5G66640.5	Thale cress	nucleus	42.77	46.06
GSMUA_Achr9P07650_001	Banana	cytosol	27.17	43.79
TraesCS2D01G016500.1	Wheat	cytosol	18.5	43.64
CDX81383	Canola	cytosol	40.08	43.61
CDY47008	Canola	cytosol, nucleus, peroxisome	36.42	41.27
HORVU7Hr1G118120.1	Barley	cytosol	3.28	39.53
Os06t0182500-02	Rice	cytosol	35.07	37.45
GSMUA_Achr6P28210_001	Banana	cytosol	34.1	37.11
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	31.79	37.0
Os03t0626600-01	Rice	plasma membrane	34.68	36.66
TraesCS2D01G016900.1	Wheat	cytosol	35.26	36.31
TraesCSU01G007800.1	Wheat	cytosol	35.26	36.31
TraesCS2B01G007700.1	Wheat	cytosol	35.26	36.31
EES16286	Sorghum	cytosol	35.45	36.22
GSMUA_Achr4P23130_001	Banana	mitochondrion	32.95	35.7
Os12t0596800-01	Rice	plasma membrane	33.33	35.6
CDY45247	Canola	cytosol	42.0	35.33
CDY26685	Canola	cytosol, mitochondrion	34.49	35.31
Zm00001d035844_P004	Maize	cytosol	34.49	35.24
CDY41035	Canola	cytosol, mitochondrion	34.3	35.11
TraesCS5D01G072300.1	Wheat	nucleus	32.76	34.84
TraesCS5A01G060800.1	Wheat	cytosol	32.76	34.84
KXG19479	Sorghum	cytosol	34.3	34.77
CDX96669	Canola	cytosol	33.72	34.25
CDX83776	Canola	cytosol	33.53	34.05
Zm00001d033289_P001	Maize	cytosol	6.74	33.98
OQU91328	Sorghum	cytosol, mitochondrion	32.76	33.66
Zm00001d033297_P003	Maize	cytosol, mitochondrion	32.56	33.6
TraesCS5B01G071300.1	Wheat	mitochondrion	32.95	33.14
CDY54205	Canola	cytosol	40.66	33.02
CDX75603	Canola	mitochondrion	37.19	32.6
CDX69251	Canola	mitochondrion, nucleus	37.38	32.5
TraesCS4A01G245200.2	Wheat	cytosol	32.56	31.35
CDY07633	Canola	plastid	30.83	31.19
CDY61785	Canola	plastid	30.83	31.01
TraesCS4D01G069000.1	Wheat	cytosol	32.37	30.55
TraesCS4B01G070200.1	Wheat	cytosol	31.98	30.46
CDX74829	Canola	cytosol, plastid	30.64	30.17
CDY54207	Canola	extracellular, plasma membrane	38.92	30.06
CDY20486	Canola	cytosol, plastid	30.44	30.04
Solyc01g105210.2.1	Tomato	extracellular	6.74	28.93
Solyc01g105200.2.1	Tomato	cytosol	8.86	28.4
CDY54206	Canola	cytosol	23.51	28.18
Zm00001d030953_P001	Maize	plastid	30.06	27.81
PGSC0003DMT400032774	Potato	cytosol	14.07	25.61
PGSC0003DMT400032779	Potato	cytosol	9.83	24.17
GSMUA_Achr9P07640_001	Banana	cytosol	6.74	22.44
Solyc01g105180.2.1	Tomato	cytosol	15.22	20.31

Protein Annotations

EnsemblPlants:CDX81382	EnsemblPlantsGene:GSBRNA2T00134958001	Gene3D:2.10.110.10	GO:A0A078CX92	InterPro:DA1-like	InterPro:IPR001781
InterPro:Znf_LIM	ncoils:Coil	PANTHER:PTHR24209	PANTHER:PTHR24209:SF13	PFAM:PF00412	PFAM:PF12315
PFscan:PS50023	ProteinID:CDX81382	ProteinID:CDX81382.1	ScanProsite:PS00478	SEG:seg	SMART:SM00132
SUPFAM:SSF57716	UniParc:UPI0004EED738	MapMan:19.2.2.1.7	:	:	:

Description

BnaC09g07930D

Coordinates

chrLK031824:-:1412628..1415387

Molecular Weight (calculated)

59438.5 Da

IEP (calculated)

5.011

GRAVY (calculated)

-0.685

Length

519 amino acids

Sequence
(BLAST)

001: MGWFSCFTPS TKQDDPSEDH YKTAIKISRH EKEDGIVRQK REKDEQVAIE RATEESLKQL EKEEAERRLQ ESKEESKREK VDDDDDDQVD TEQNDMNRAT
101: EESLKSFEKE EEKRIRLEES KEEGKRKQVE EDKVQIKHSK DEKVNPPSPP MICNGCKSEI KDGLPVNAFG GLWHPQCLCC LYCHKPIAED EITKRGKFHR
201: PCYREHLCTC CVCQKKIPST EEGIQFCEHP FWKEKYCPCH EGDGTAKCCS CERLEPKGTN FVMLGDDRWL CLQCMESSVM DTDECIDLHF EIREFFDGLF
301: LTIKKEFPVL LVEKQALNKA EQEEKIDSHH AVVTRGLCLS EVQNVTSVKE GPKMGPNNKL TDMVTETQVV SGCPVTAILI IYGLPRLLTG YILAHEMMHA
401: YLRLNGCNNL NNVLEEGICQ VLGHMWLETQ RYAPIDVAAA SSSSNASKKG EWSEFEKKLV DQQSMVKGLG KLTIWCQVPA SRKPSKRFFP AGVEEEEDES
501: AHFFFLVKLE TLEYLAGAD

Best Arabidopsis Sequence Match ( AT5G66640.5 )
(BLAST)

001: MSCCFSCFKH DPSKDPLNTA LVISRYEEED RMVRRKRQEE DEKIEIERVK EESLKLAKQA EEKRRLEESK EQGKRIQVDD DQLAKTTSKD KGQINHSKDV
101: VEEDVNPPPS SIDGKSEIGD GTSVNPRCLC CFHCHRPFVM HEILKKGKFH IDCYKEYYRN RNCYVCQQKI PVNAEGIRKF SEHPFWKEKY CPIHDEDGTA
201: KCCSCERLEP RGTNYVMLGD FRWLCIECMG SAVMDTNEVQ PLHFEIREFF EGLFLKVDKE FALLLVEKQA LNKAEEEEKI DYHRAAVTRG LCMSEEQIVP
301: SIIKGPRMGP DNQLITDIVT ESQRVSGFEV TGILIIYGLP RLLTGYILAH EMMHAWLRLN GYKNLKLELE EGLCQALGLR WLESQTFAST DAAAAAAVAS
401: SSSFSSSTAP PAAITSKKSD DWSIFEKKLV EFCMNQIKED DSPVYGLGFK QVYEMMVSNN YNIKDTLKDI VSASNATPDS TV

Arabidopsis Description

DAR3DA1-related protein 3 [Source:TAIR;Acc:AT5G66640]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.