CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96669	Canola	cytosol	96.09	96.09
CDY26685	Canola	cytosol, mitochondrion	82.39	83.04
CDY41035	Canola	cytosol, mitochondrion	82.19	82.84
AT1G19270.1	Thale cress	cytosol, mitochondrion	83.37	80.08
TraesCS2D01G016500.1	Wheat	cytosol	29.75	69.09
GSMUA_Achr9P07650_001	Banana	cytosol	43.44	68.94
VIT_18s0001g11820.t01	Wine grape	cytosol	62.62	66.81
GSMUA_Achr6P28210_001	Banana	cytosol	60.67	64.99
PGSC0003DMT400043506	Potato	cytosol	61.06	64.2
Solyc04g079840.2.1	Tomato	cytosol	60.86	63.99
KRH05774	Soybean	cytosol	58.9	62.97
Os06t0182500-02	Rice	cytosol	59.88	62.96
KRH15264	Soybean	cytosol	58.9	62.32
TraesCS2B01G007700.1	Wheat	cytosol	60.27	61.11
TraesCS2D01G016900.1	Wheat	cytosol	59.88	60.71
TraesCSU01G007800.1	Wheat	cytosol	59.69	60.52
Zm00001d035844_P004	Maize	cytosol	59.88	60.24
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	52.25	59.87
KXG19479	Sorghum	cytosol	59.88	59.77
GSMUA_Achr4P23130_001	Banana	mitochondrion	52.05	55.53
Os03t0626600-01	Rice	plasma membrane	51.86	53.97
EES16286	Sorghum	cytosol	53.62	53.94
Os12t0596800-01	Rice	plasma membrane	51.27	53.91
OQU91328	Sorghum	cytosol, mitochondrion	52.84	53.47
Zm00001d033297_P003	Maize	cytosol, mitochondrion	52.25	53.08
TraesCS5A01G060800.1	Wheat	cytosol	50.68	53.07
TraesCS5D01G072300.1	Wheat	nucleus	50.68	53.07
Zm00001d033289_P001	Maize	cytosol	10.37	51.46
TraesCS5B01G071300.1	Wheat	mitochondrion	50.68	50.19
GSMUA_Achr9P07640_001	Banana	cytosol	15.07	49.36
TraesCS4A01G245200.2	Wheat	cytosol	50.1	47.5
CDX75603	Canola	mitochondrion	54.99	47.47
CDX69251	Canola	mitochondrion, nucleus	54.99	47.07
TraesCS4D01G069000.1	Wheat	cytosol	50.29	46.73
TraesCS4B01G070200.1	Wheat	cytosol	49.51	46.42
CDY18615	Canola	cytosol	31.31	45.58
CDY07633	Canola	plastid	44.42	44.25
CDY61785	Canola	plastid	44.62	44.19
CDX74829	Canola	cytosol, plastid	45.21	43.83
CDY20486	Canola	cytosol, plastid	45.01	43.73
Zm00001d030953_P001	Maize	plastid	47.16	42.96
CDX81385	Canola	cytosol	35.42	38.27
CDX81383	Canola	cytosol	34.64	37.11
CDX81381	Canola	cytosol	36.01	35.8
CDY18616	Canola	nucleus	34.83	35.46
CDY47008	Canola	cytosol, nucleus, peroxisome	30.53	34.06
CDX81382	Canola	cytosol	34.05	33.53
CDY45247	Canola	cytosol	35.03	29.01
CDY54205	Canola	cytosol	35.23	28.17
VIT_18s0041g02180.t01	Wine grape	mitochondrion	36.4	26.96
CDY54206	Canola	cytosol	21.33	25.17
CDY54207	Canola	extracellular, plasma membrane	33.07	25.15
VIT_18s0041g02190.t01	Wine grape	cytosol	17.81	21.77

Protein Annotations

MapMan:19.2.2.1.7	Gene3D:2.10.110.10	GO:A0A078D314	EnsemblPlants:CDX83776	ProteinID:CDX83776	ProteinID:CDX83776.1
InterPro:DA1-like	EnsemblPlantsGene:GSBRNA2T00139518001	InterPro:IPR001781	InterPro:IPR003903	PFAM:PF00412	PFAM:PF12315
ScanProsite:PS00478	PFscan:PS50023	PFscan:PS50330	PANTHER:PTHR24209	PANTHER:PTHR24209:SF7	SMART:SM00132
SMART:SM00726	SUPFAM:SSF57716	InterPro:UIM_dom	UniParc:UPI0004EDC72B	InterPro:Znf_LIM	SEG:seg

Description

BnaC08g18690D

Coordinates

chrLK031834:-:362862..365111

Molecular Weight (calculated)

58443.7 Da

IEP (calculated)

6.272

GRAVY (calculated)

-0.669

Length

511 amino acids

Sequence
(BLAST)

001: MGWLNKIFKG SNQRPPVGNE YYHHNGGYYE NYPHEHSEPS AETDADHTQE PSTSEEETWN GQENEEVDRA IALSILEEEN QGPETNTGAW KHAMMDDDEQ
101: LARAIQESMI VRNGTTYDFG NAYGNGHMHG GGNVYDSGDI YYPRPIAFSM DFRICAGCNM EIGHGRYLNC INALWHPQCF RCHGCSHPIS EYEFSTSGNY
201: PFHKACYRER FHPKCDVCSL FIPTNHAGLI EYRAHPFWVQ KYCPSHEHDA TPRCCSCERM ESRNTGYFEL NDGRKLCLEC LDSSVMDTFQ CQPLYLQIQE
301: FYEGLNMTVE QEVPLLLVER QALNEAREGE RNGHYHMPET RGLCLSEEQT VRTVRKRSKG NWSGNMITEQ FKLTRRCEVT AILILFGLPR LLTGSILAHE
401: MMHAWMRLKG FRTLSQDVEE GICQVMAHKW LEVELAAGSR NSNAASSSYG GVKKGPKSQY ERKLGEFFKH QIESDASPVY GDGFRAGRLA VSKYGLRRTL
501: EHIQMTGRFP V

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.