CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26685	Canola	cytosol, mitochondrion	98.22	98.22
AT1G19270.1	Thale cress	cytosol, mitochondrion	88.36	84.21
CDX96669	Canola	cytosol	83.04	82.39
CDX83776	Canola	cytosol	82.84	82.19
TraesCS2D01G016500.1	Wheat	cytosol	31.36	72.27
GSMUA_Achr9P07650_001	Banana	cytosol	45.36	71.43
VIT_18s0001g11820.t01	Wine grape	cytosol	65.48	69.31
GSMUA_Achr6P28210_001	Banana	cytosol	63.71	67.71
KRH05774	Soybean	cytosol	62.33	66.11
KRH15264	Soybean	cytosol	62.33	65.42
PGSC0003DMT400043506	Potato	cytosol	61.93	64.61
Solyc04g079840.2.1	Tomato	cytosol	61.74	64.4
Os06t0182500-02	Rice	cytosol	61.74	64.4
TraesCS2B01G007700.1	Wheat	cytosol	62.13	62.5
TraesCS2D01G016900.1	Wheat	cytosol	61.74	62.1
TraesCSU01G007800.1	Wheat	cytosol	61.54	61.9
Zm00001d035844_P004	Maize	cytosol	61.74	61.61
KXG19479	Sorghum	cytosol	61.74	61.13
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	53.25	60.54
GSMUA_Achr4P23130_001	Banana	mitochondrion	54.83	58.04
Os03t0626600-01	Rice	plasma membrane	53.25	54.99
OQU91328	Sorghum	cytosol, mitochondrion	54.64	54.85
Os12t0596800-01	Rice	plasma membrane	52.47	54.73
EES16286	Sorghum	cytosol	54.83	54.72
Zm00001d033289_P001	Maize	cytosol	11.05	54.37
TraesCS5A01G060800.1	Wheat	cytosol	52.27	54.3
TraesCS5D01G072300.1	Wheat	nucleus	52.27	54.3
Zm00001d033297_P003	Maize	cytosol, mitochondrion	53.85	54.27
TraesCS5B01G071300.1	Wheat	mitochondrion	52.27	51.36
CDX75603	Canola	mitochondrion	57.2	48.99
CDX69251	Canola	mitochondrion, nucleus	57.2	48.58
CDY18615	Canola	cytosol	33.53	48.43
TraesCS4A01G245200.2	Wheat	cytosol	50.1	47.12
GSMUA_Achr9P07640_001	Banana	cytosol	14.4	46.79
TraesCS4B01G070200.1	Wheat	cytosol	50.1	46.61
TraesCS4D01G069000.1	Wheat	cytosol	50.49	46.55
CDY07633	Canola	plastid	46.15	45.61
CDY61785	Canola	plastid	46.35	45.54
CDX74829	Canola	cytosol, plastid	47.34	45.54
CDY20486	Canola	cytosol, plastid	46.94	45.25
Zm00001d030953_P001	Maize	plastid	48.52	43.85
CDX81385	Canola	cytosol	37.48	40.17
CDX81383	Canola	cytosol	36.09	38.36
CDX81381	Canola	cytosol	36.49	35.99
CDY18616	Canola	nucleus	35.31	35.66
CDY47008	Canola	cytosol, nucleus, peroxisome	31.16	34.5
CDX81382	Canola	cytosol	35.11	34.3
CDY45247	Canola	cytosol	36.69	30.15
CDY54205	Canola	cytosol	36.69	29.11
VIT_18s0041g02180.t01	Wine grape	mitochondrion	36.29	26.67
CDY54207	Canola	extracellular, plasma membrane	34.32	25.89
CDY54206	Canola	cytosol	21.7	25.4
VIT_18s0041g02190.t01	Wine grape	cytosol	17.95	21.77

Protein Annotations

MapMan:19.2.2.1.7	Gene3D:2.10.110.10	GO:A0A078HR52	UniProt:A0A078HR52	EnsemblPlants:CDY41035	ProteinID:CDY41035
ProteinID:CDY41035.1	InterPro:DA1-like	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00072337001
InterPro:IPR001781	InterPro:IPR003903	PFAM:PF00412	PFAM:PF02809	PFAM:PF12315	ScanProsite:PS00478
PFscan:PS50023	PFscan:PS50330	PANTHER:PTHR24209	PANTHER:PTHR24209:SF7	SMART:SM00132	SMART:SM00726
SUPFAM:SSF57716	InterPro:UIM_dom	UniParc:UPI0004EDCEA8	InterPro:Znf_LIM	SEG:seg	:

Description

BnaC05g14930DBnaC05g14930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR52]

Coordinates

chrLK032488:+:225107..227849

Molecular Weight (calculated)

57525.6 Da

IEP (calculated)

6.366

GRAVY (calculated)

-0.664

Length

507 amino acids

Sequence
(BLAST)

001: MGWFNKIFKG STQRFRLGND HDHNGYYQSY PHDEPSADTD PDPDPDETHT QEPSTSEEDT SGQENEDIDR AIALSLIENS QGHTNTGAGK YAMVDEDEQL
101: ARAIQESMVV GNTPRQKHGS SGNVYANGDI YYPRPTAFPM DFRICAGCNM EIGHGRYLNC LNALWHPECF RCYGCRHPIS EYEFSTSGNY PFHKACYRER
201: YHPKCDVCSL FIPTNHAGLI EYRAHPFWVQ KYCPSHEHDA TPRCCSCERM EPRNTGYVEL NDGRKLCLEC LDSAVMDTFQ CQPLYLQIQE FYEGLFMKVE
301: QDVPLLLVER QALNEAREGE KNGHYHMPET RGLCLSEEQT VSTVRKRSKH GTGNWAGNMI TEPYKLTRQC EVTAILILFG LPRLLTGSIL AHEMMHAWMR
401: LKGFRTLSQD VEEGICQVMA HKWLEAELAA GSRNSNVASS SSSSSGGLKK GPRSQYERKL GEFFKHQIES DASPVYGDGF RAGRLAVNKY GLPKTLEHIH
501: MTGRFPV

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.