CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07633	Canola	plastid	88.37	88.89
CDX74829	Canola	cytosol, plastid	83.53	81.78
CDY20486	Canola	cytosol, plastid	83.14	81.56
AT2G39830.2	Thale cress	cytosol, plastid	81.78	79.47
PGSC0003DMT400069927	Potato	cytosol	60.27	69.42
VIT_13s0019g02430.t01	Wine grape	plastid	67.44	68.91
KRG97826	Soybean	cytosol	56.78	66.59
Solyc05g052910.2.1	Tomato	plastid	64.73	66.27
KRH15044	Soybean	cytosol	63.57	65.08
GSMUA_Achr5P07030_001	Banana	cytosol	56.78	62.47
KRH31044	Soybean	nucleus	61.24	62.08
Solyc03g079910.2.1	Tomato	cytosol	65.5	61.57
GSMUA_Achr10P...	Banana	mitochondrion	56.2	61.44
PGSC0003DMT400055872	Potato	cytosol	62.21	60.91
KRH73095	Soybean	plastid	63.95	58.82
GSMUA_Achr8P19520_001	Banana	cytosol	54.07	58.74
KXG39715	Sorghum	endoplasmic reticulum	55.43	56.3
Os03t0267800-01	Rice	cytosol	54.07	55.69
HORVU4Hr1G060560.7	Barley	cytosol	53.88	54.62
TraesCS4A01G093500.1	Wheat	endoplasmic reticulum	54.07	54.6
TraesCS4D01G211600.2	Wheat	endoplasmic reticulum	54.07	54.6
Zm00001d028567_P001	Maize	mitochondrion	53.29	53.5
TraesCS4B01G210900.3	Wheat	cytosol	53.88	51.48
Zm00001d047837_P003	Maize	cytosol	46.12	46.39
CDY41035	Canola	cytosol, mitochondrion	45.54	46.35
CDY26685	Canola	cytosol, mitochondrion	45.35	46.15
CDX83776	Canola	cytosol	44.19	44.62
CDX96669	Canola	cytosol	43.99	44.42
CDY18615	Canola	cytosol	29.65	43.59
CDX75603	Canola	mitochondrion	48.26	42.06
CDX69251	Canola	mitochondrion, nucleus	48.26	41.71
CDX81385	Canola	cytosol	33.53	36.58
CDX81383	Canola	cytosol	31.59	34.17
CDY18616	Canola	nucleus	31.98	32.87
CDX81381	Canola	cytosol	31.59	31.71
CDY47008	Canola	cytosol, nucleus, peroxisome	27.91	31.44
CDX81382	Canola	cytosol	31.01	30.83
CDY54205	Canola	cytosol	33.33	26.92
CDY45247	Canola	cytosol	32.17	26.9
CDY54206	Canola	cytosol	20.93	24.94
CDY54207	Canola	extracellular, plasma membrane	32.17	24.7

Protein Annotations

EnsemblPlants:CDY61785	EnsemblPlantsGene:GSBRNA2T00034362001	Gene3D:2.10.110.10	GO:A0A078J9L2	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:DA1-like	InterPro:IPR001781	InterPro:Znf_LIM	PANTHER:PTHR24209	PANTHER:PTHR24209:SF22
PFAM:PF00412	PFAM:PF12315	PFscan:PS50023	ProteinID:CDY61785	ProteinID:CDY61785.1	ScanProsite:PS00478
SEG:seg	SMART:SM00132	UniParc:UPI0004EDB2AB	UniProt:A0A078J9L2	MapMan:19.2.2.1.7	:

Description

BnaC03g72630DBnaC03g72630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9L2]

Coordinates

chrLK034038:-:35583..39670

Molecular Weight (calculated)

58009.6 Da

IEP (calculated)

7.604

GRAVY (calculated)

-0.556

Length

516 amino acids

Sequence
(BLAST)

001: MDSSSYGVSH VSHISNPCIF GAGSSSSPGK KWNLMKWVSK LFKSGSNGGT SGARTNHHPP QFQEDENMVF PLPPSSSDDR SRASRDKEEL DRALSVSLAD
101: DTNRPYGYGW SMDNNSDFPR PFHSGLNPSF IPPYEPSYQV RRPQSRICGG CNSDIGLGNY LGCMGTFFHP DCFCCDSCRY PITEHEFSLS GTKPYHKICF
201: KELTHPKCEV CHHFIPTNDA GLIEYRCHPF WNQKYCPSHE HDRTARCCSC ERLESWEVRY YTLDDGRSLC LECMETAITD TGDCQPLYHA IRDYYEGMYM
301: KLEQQIPMLL VQREALNDAI VGEKHGYHHM PETRGLCLSE EQTVTSVLKR PRLGAHRLVG MRTQPQKLTR KCEVTAILVL YGLPRLLTGA ILAHELMHGW
401: LRLKGYRNLN PEVEEGICQV LSYMWLESEV LSDPSSRSMP STSTATSSSS SSSSSSNKKG GKSNVEKKLG EFFKHQIAHD ASPAYGGGFR AANAAVCKYG
501: LRRTLDHIRF TGTFPL

Best Arabidopsis Sequence Match ( AT2G39830.1 )
(BLAST)

001: MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS NGGGSGAHTN HHPPQFQEDE NMVFPLPPSS LDDRSRGARD
101: KEELDRSISL SLADNTKRPH GYGWSMDNNR DFPRPFHGGL NPSSFIPPYE PSYQYRRRQR ICGGCNSDIG SGNYLGCMGT FFHPECFRCH SCGYAITEHE
201: FSLSGTKPYH KLCFKELTHP KCEVCHHFIP TNDAGLIEYR CHPFWNQKYC PSHEYDKTAR CCSCERLESW DVRYYTLEDG RSLCLECMET AITDTGECQP
301: LYHAIRDYYE GMYMKLDQQI PMLLVQREAL NDAIVGEKNG YHHMPETRGL CLSEEQTVTS VLRRPRLGAH RLVGMRTQPQ RLTRKCEVTA ILVLYGLPRL
401: LTGAILAHEL MHGWLRLNGF RNLNPEVEEG ICQVLSYMWL ESEVLSDPST RNLPSTSSVA TSSSSSFSNK KGGKSNVEKK LGEFFKHQIA HDASPAYGGG
501: FRAANAAACK YGLRRTLDHI RLTGTFPL

Arabidopsis Description

DAR2DA1-related protein 2 [Source:TAIR;Acc:AT2G39830]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.