CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G211600.2	Wheat	endoplasmic reticulum	86.81	86.3
TraesCS4A01G093500.1	Wheat	endoplasmic reticulum	86.61	86.11
Os03t0267800-01	Rice	cytosol	83.66	84.83
HORVU4Hr1G060560.7	Barley	cytosol	84.45	84.28
Zm00001d047837_P003	Maize	cytosol	81.3	80.51
TraesCS4B01G210900.3	Wheat	cytosol	83.27	78.33
GSMUA_Achr5P07030_001	Banana	cytosol	63.98	69.3
GSMUA_Achr10P...	Banana	mitochondrion	64.17	69.07
GSMUA_Achr8P19520_001	Banana	cytosol	60.83	65.05
PGSC0003DMT400069927	Potato	cytosol	56.1	63.62
KRG97826	Soybean	cytosol	52.17	60.23
VIT_13s0019g02430.t01	Wine grape	plastid	59.65	60.0
Solyc05g052910.2.1	Tomato	plastid	57.68	58.13
KRH15044	Soybean	cytosol	56.3	56.75
CDY07633	Canola	plastid	56.69	56.14
Bra000152.1-P	Field mustard	plastid	56.5	55.84
CDY61785	Canola	plastid	56.3	55.43
KRH31044	Soybean	nucleus	54.72	54.62
Solyc03g079910.2.1	Tomato	cytosol	58.27	53.92
CDX74829	Canola	cytosol, plastid	55.71	53.7
AT2G39830.2	Thale cress	cytosol, plastid	55.91	53.48
PGSC0003DMT400055872	Potato	cytosol	55.31	53.32
CDY20486	Canola	cytosol, plastid	55.12	53.23
Bra005011.1-P	Field mustard	cytosol, plastid	51.97	52.69
KRH73095	Soybean	plastid	57.87	52.41
KXG19479	Sorghum	cytosol	52.36	51.95
EES16286	Sorghum	cytosol	50.59	50.59
OQU91328	Sorghum	cytosol, mitochondrion	48.62	48.91

Protein Annotations

MapMan:19.2.2.1.7	Gene3D:2.10.110.10	EntrezGene:8081523	UniProt:A0A1B6QP83	InterPro:DA1-like	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	InterPro:IPR001781	InterPro:IPR003903	EnsemblPlants:KXG39715	ProteinID:KXG39715
ProteinID:KXG39715.1	PFAM:PF00412	PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023	PANTHER:PTHR24209
PANTHER:PTHR24209:SF21	SMART:SM00132	SMART:SM00726	EnsemblPlantsGene:SORBI_3001G425100	SUPFAM:SSF57716	unigene:Sbi.17070
SignalP:SignalP-noTM	InterPro:UIM_dom	UniParc:UPI0003C6CC61	InterPro:Znf_LIM	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:+:70506923..70511261

Molecular Weight (calculated)

57690.9 Da

IEP (calculated)

7.932

GRAVY (calculated)

-0.648

Length

508 amino acids

Sequence
(BLAST)

001: MLTQAISYGV VSMCLLLLSS AERRSGFMKW LCNFLKGPKP GEPNRRRPQV TAGEEEDALW HQRPVRPKND PPRNDNEELD RAIAESLTED VKPPKEKNHK
101: GDNNDEDLAR AIQDSLNMNP YTPYNPYAPS QAQPRGHRVC GSCKHEIGHG HYLSCMGIYW HPQCFRCSSC GHPIRETEFT LLGTDPYHKL CYKELHHPKC
201: DVCLQFIPTN RSGLIEYRAH PFWGQKYCPL HEHDRTPRCC SCEKMEPRNT KYMSLGDGRS LCMECLGSAV MDTGECQPLY HSIRDYYEGM NMKLDQQIPM
301: LLVERQALNE AMEGESRGPH HMPETRGLCL SEEQTVSSIL RRPRIGGNRL LDMRTQPQKL TRRCEVTAIL VLYGLPRLLT GSILAHELMH GWLRLKGYRN
401: LNAEVEEGIC QVMSYLWLES EILPSSSRHA QPSSSYASSS SSSYPPTSSK KGGISHTEKK LGEFFMHQIA NDTSTAYGDG FRTAYAAVNK YGLRQTLNHI
501: RLTGGFPV

Best Arabidopsis Sequence Match ( AT2G39830.1 )
(BLAST)

001: MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS NGGGSGAHTN HHPPQFQEDE NMVFPLPPSS LDDRSRGARD
101: KEELDRSISL SLADNTKRPH GYGWSMDNNR DFPRPFHGGL NPSSFIPPYE PSYQYRRRQR ICGGCNSDIG SGNYLGCMGT FFHPECFRCH SCGYAITEHE
201: FSLSGTKPYH KLCFKELTHP KCEVCHHFIP TNDAGLIEYR CHPFWNQKYC PSHEYDKTAR CCSCERLESW DVRYYTLEDG RSLCLECMET AITDTGECQP
301: LYHAIRDYYE GMYMKLDQQI PMLLVQREAL NDAIVGEKNG YHHMPETRGL CLSEEQTVTS VLRRPRLGAH RLVGMRTQPQ RLTRKCEVTA ILVLYGLPRL
401: LTGAILAHEL MHGWLRLNGF RNLNPEVEEG ICQVLSYMWL ESEVLSDPST RNLPSTSSVA TSSSSSFSNK KGGKSNVEKK LGEFFKHQIA HDASPAYGGG
501: FRAANAAACK YGLRRTLDHI RLTGTFPL

Arabidopsis Description

DAR2DA1-related protein 2 [Source:TAIR;Acc:AT2G39830]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.