Factsheet for Solyc03g079910.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055872	Potato	cytosol	92.9	96.77
Solyc05g052910.2.1	Tomato	plastid	75.96	82.74
VIT_13s0019g02430.t01	Wine grape	plastid	70.49	76.63
KRG97826	Soybean	cytosol	55.92	69.77
CDY07633	Canola	plastid	63.93	68.42
KRH31044	Soybean	nucleus	63.02	67.98
Bra000152.1-P	Field mustard	plastid	63.39	67.7
KRH15044	Soybean	cytosol	61.75	67.26
GSMUA_Achr5P07030_001	Banana	cytosol	56.1	65.67
CDY61785	Canola	plastid	61.57	65.5
CDX74829	Canola	cytosol, plastid	62.66	65.28
GSMUA_Achr10P...	Banana	mitochondrion	55.92	65.04
CDY20486	Canola	cytosol, plastid	62.11	64.83
AT2G39830.2	Thale cress	cytosol, plastid	62.48	64.6
Bra005011.1-P	Field mustard	cytosol, plastid	58.83	64.47
GSMUA_Achr8P19520_001	Banana	cytosol	53.73	62.11
KRH73095	Soybean	plastid	62.11	60.78
KXG39715	Sorghum	endoplasmic reticulum	53.92	58.27
TraesCS4A01G093500.1	Wheat	endoplasmic reticulum	52.28	56.16
TraesCS4D01G211600.2	Wheat	endoplasmic reticulum	52.28	56.16
HORVU4Hr1G060560.7	Barley	cytosol	51.91	55.99
Os03t0267800-01	Rice	cytosol	51.0	55.89
Zm00001d028567_P001	Maize	mitochondrion	51.37	54.86
Solyc04g079840.2.1	Tomato	cytosol	46.27	52.26
TraesCS4B01G210900.3	Wheat	cytosol	51.18	52.04
Solyc02g089930.2.1	Tomato	cytosol	46.45	49.51
Zm00001d047837_P003	Maize	cytosol	45.36	48.54
Solyc01g105210.2.1	Tomato	extracellular	10.38	47.11
Solyc01g105200.2.1	Tomato	cytosol	9.11	30.86
Solyc01g105180.2.1	Tomato	cytosol	18.4	25.96

Protein Annotations

EnsemblPlants:Solyc03g079910.2.1	EnsemblPlantsGene:Solyc03g079910.2	Gene3D:2.10.110.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
InterPro:DA1-like	InterPro:IPR001781	InterPro:Znf_LIM	PANTHER:PTHR24209	PANTHER:PTHR24209:SF22	PFAM:PF00412
PFAM:PF12315	PFscan:PS50023	ScanProsite:PS00478	SEG:seg	SMART:SM00132	SUPFAM:SSF57716
UniParc:UPI0002768197	UniProt:K4BHW8	MapMan:19.2.2.1.7	:	:	:

Description

No Description!

Coordinates

chr3:-:51790009..51794285

Molecular Weight (calculated)

62432.5 Da

IEP (calculated)

7.343

GRAVY (calculated)

-0.462

Length

549 amino acids

Sequence
(BLAST)

001: MSSSNVNQFS QPCIYGNVSK VPRFDFFRCL TYTLLSISLE LRKKISFFDD DDIIVGFKAG YFVSSYAERK SRFMKWLTKI FKGNRGLPRG QQPQFLGDEN
101: MVWRAPARTL DDHSKASKEK EELDHATAVS LSEDLKRPGY KCRTDNDEDL ERSLDHDLSS SSYPPYPPPY APSYAPWEYN PRSYRICNGC HGDIGSGNYL
201: GCMGTFFHPE CFLCRACGYP ITEHEFSLSG NNTYHKSCFR EMTHPKCEVC FQFIPTNAAG LIEYRCHPFW SQKYCPSHEH DVTKRCCSCE RLEPWNARYV
301: SLGDGRSLCL ECMESAIMDT GDCQPLYHAI RDYYEGMNMK IEQQVPMLLV ERQALNEAIE GEKHGFHHMP ETRGLCLSEE QTVTSILKRP RMGGREVVGI
401: RTHPQKLTRK CEVTAILVLF GLPRLLTGAI LAHELMHAWL RLKGYRNLSL EVEEGICQVL SYMWLESEVM PGSRDMPSTS TASSSSMSST KKGVKSGVEN
501: KLGEFFMHQI AHDTSPAYGG GFRSANEAVN KYGLRCTLDH IRLTGSFPL

Best Arabidopsis Sequence Match ( AT2G39830.1 )
(BLAST)

001: MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS NGGGSGAHTN HHPPQFQEDE NMVFPLPPSS LDDRSRGARD
101: KEELDRSISL SLADNTKRPH GYGWSMDNNR DFPRPFHGGL NPSSFIPPYE PSYQYRRRQR ICGGCNSDIG SGNYLGCMGT FFHPECFRCH SCGYAITEHE
201: FSLSGTKPYH KLCFKELTHP KCEVCHHFIP TNDAGLIEYR CHPFWNQKYC PSHEYDKTAR CCSCERLESW DVRYYTLEDG RSLCLECMET AITDTGECQP
301: LYHAIRDYYE GMYMKLDQQI PMLLVQREAL NDAIVGEKNG YHHMPETRGL CLSEEQTVTS VLRRPRLGAH RLVGMRTQPQ RLTRKCEVTA ILVLYGLPRL
401: LTGAILAHEL MHGWLRLNGF RNLNPEVEEG ICQVLSYMWL ESEVLSDPST RNLPSTSSVA TSSSSSFSNK KGGKSNVEKK LGEFFKHQIA HDASPAYGGG
501: FRAANAAACK YGLRRTLDHI RLTGTFPL

Arabidopsis Description

DAR2DA1-related protein 2 [Source:TAIR;Acc:AT2G39830]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.