Factsheet for VIT_13s0019g02430.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069927	Potato	cytosol	68.12	76.79
Solyc05g052910.2.1	Tomato	plastid	75.64	75.79
KRG97826	Soybean	cytosol	62.18	71.36
Solyc03g079910.2.1	Tomato	cytosol	76.63	70.49
KRH31044	Soybean	nucleus	70.3	69.74
Bra000152.1-P	Field mustard	plastid	70.69	69.46
CDY07633	Canola	plastid	70.5	69.4
PGSC0003DMT400055872	Potato	cytosol	72.28	69.26
KRH15044	Soybean	cytosol	69.11	69.25
AT2G39830.2	Thale cress	cytosol, plastid	72.48	68.93
CDX74829	Canola	cytosol, plastid	71.09	68.12
CDY61785	Canola	plastid	68.91	67.44
CDY20486	Canola	cytosol, plastid	70.1	67.3
Bra005011.1-P	Field mustard	cytosol, plastid	66.34	66.87
GSMUA_Achr5P07030_001	Banana	cytosol	61.78	66.52
GSMUA_Achr10P...	Banana	mitochondrion	60.79	65.04
GSMUA_Achr8P19520_001	Banana	cytosol	59.8	63.58
KRH73095	Soybean	plastid	68.32	61.5
KXG39715	Sorghum	endoplasmic reticulum	60.0	59.65
HORVU4Hr1G060560.7	Barley	cytosol	58.22	57.76
TraesCS4A01G093500.1	Wheat	endoplasmic reticulum	58.42	57.73
TraesCS4D01G211600.2	Wheat	endoplasmic reticulum	58.42	57.73
Os03t0267800-01	Rice	cytosol	57.23	57.68
Zm00001d028567_P001	Maize	mitochondrion	57.82	56.81
TraesCS4B01G210900.3	Wheat	cytosol	57.43	53.7
VIT_04s0023g01030.t01	Wine grape	cytosol	51.88	53.69
VIT_18s0001g11820.t01	Wine grape	cytosol	49.51	52.19
Zm00001d047837_P003	Maize	cytosol	50.1	49.32
VIT_04s0023g01040.t01	Wine grape	plasma membrane	46.73	40.62
VIT_18s0041g02180.t01	Wine grape	mitochondrion	32.08	23.48
VIT_18s0041g02190.t01	Wine grape	cytosol	14.65	17.7

Protein Annotations

EntrezGene:100256525	wikigene:100256525	MapMan:19.2.2.1.7	Gene3D:2.10.110.10	ProteinID:CBI31607	ProteinID:CBI31607.3
UniProt:D7TLM0	InterPro:DA1-like	EMBL:FN595998	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
InterPro:IPR001781	EntrezGene:LOC100256525	wikigene:LOC100256525	PFAM:PF00412	PFAM:PF12315	ScanProsite:PS00478
PFscan:PS50023	PANTHER:PTHR24209	PANTHER:PTHR24209:SF22	SMART:SM00132	UniParc:UPI0001984848	ArrayExpress:VIT_13s0019g02430
EnsemblPlantsGene:VIT_13s0019g02430	EnsemblPlants:VIT_13s0019g02430.t01	RefSeq:XP_002277622	RefSeq:XP_002277622.1	InterPro:Znf_LIM	SEG:seg

Description

No Description!

Coordinates

chr13:+:3681128..3688621

Molecular Weight (calculated)

56555.5 Da

IEP (calculated)

7.832

GRAVY (calculated)

-0.431

Length

505 amino acids

Sequence
(BLAST)

001: MASSGVNHLS QPCIYGQLAS SYAERKSRFM KWLSKLFKSG GSGRGVIGGQ HPQFLGDENM VWRVPPRSLD GRPRSDKEKE DLDHAIALSL AEDLKRPKGY
101: GWGSDTDEDL SRSLHDSLNT SSYPPYAPTP YYPSGYRVCG ACKQDIGFGN YLGCMGTFFH PECFRCRSCG YPITEHEFSL SGRDAYHKSC FKELTHPKCE
201: VCHQFIPTNG AGLIEYRCHP FWSQKYCPSH EHDNVARCCS CERLESWNAR YISLGDGRSL CLECMESAIM DTGDCHSLYH AIRDFFEGMN MKLDQEIPML
301: LVERQALNEA IVGEKNGHHH LPETRGLCLS EEQTVKSIQV LRRPRLAGQR LVGMRSQPQK LTRKCEVTAI LVLYGLPRLL TGAILAHELM HGWLRLKGFR
401: NLSPEVEEGI CQVLSYMWLE SEVMPGFNRN MASTSSGAAS SSSSSSKKGG KSEVEKKLGE FFMHQIAHDV SPAYGEGFRA ANAAVNKFGL RITLDHIRLT
501: GSFPL

Best Arabidopsis Sequence Match ( AT2G39830.1 )
(BLAST)

001: MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS NGGGSGAHTN HHPPQFQEDE NMVFPLPPSS LDDRSRGARD
101: KEELDRSISL SLADNTKRPH GYGWSMDNNR DFPRPFHGGL NPSSFIPPYE PSYQYRRRQR ICGGCNSDIG SGNYLGCMGT FFHPECFRCH SCGYAITEHE
201: FSLSGTKPYH KLCFKELTHP KCEVCHHFIP TNDAGLIEYR CHPFWNQKYC PSHEYDKTAR CCSCERLESW DVRYYTLEDG RSLCLECMET AITDTGECQP
301: LYHAIRDYYE GMYMKLDQQI PMLLVQREAL NDAIVGEKNG YHHMPETRGL CLSEEQTVTS VLRRPRLGAH RLVGMRTQPQ RLTRKCEVTA ILVLYGLPRL
401: LTGAILAHEL MHGWLRLNGF RNLNPEVEEG ICQVLSYMWL ESEVLSDPST RNLPSTSSVA TSSSSSFSNK KGGKSNVEKK LGEFFKHQIA HDASPAYGGG
501: FRAANAAACK YGLRRTLDHI RLTGTFPL

Arabidopsis Description

DAR2DA1-related protein 2 [Source:TAIR;Acc:AT2G39830]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.