CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 5
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74829	Canola	cytosol, plastid	98.67	98.48
Bra005011.1-P	Field mustard	cytosol, plastid	92.97	97.6
CDY07633	Canola	plastid	88.21	90.45
AT2G39830.2	Thale cress	cytosol, plastid	91.06	90.21
CDY61785	Canola	plastid	81.56	83.14
PGSC0003DMT400069927	Potato	cytosol	60.27	70.76
VIT_13s0019g02430.t01	Wine grape	plastid	67.3	70.1
Solyc05g052910.2.1	Tomato	plastid	64.83	67.66
KRG97826	Soybean	cytosol	56.46	67.5
KRH15044	Soybean	cytosol	62.93	65.67
KRH31044	Soybean	nucleus	62.36	64.44
Solyc03g079910.2.1	Tomato	cytosol	64.83	62.11
PGSC0003DMT400055872	Potato	cytosol	61.41	61.29
GSMUA_Achr5P07030_001	Banana	cytosol	54.56	61.19
GSMUA_Achr10P...	Banana	mitochondrion	54.56	60.81
KRH73095	Soybean	plastid	62.93	59.0
GSMUA_Achr8P19520_001	Banana	cytosol	52.28	57.89
KXG39715	Sorghum	endoplasmic reticulum	53.23	55.12
Os03t0267800-01	Rice	cytosol	51.9	54.49
HORVU4Hr1G060560.7	Barley	cytosol	52.28	54.03
TraesCS4A01G093500.1	Wheat	endoplasmic reticulum	52.09	53.62
TraesCS4D01G211600.2	Wheat	endoplasmic reticulum	52.09	53.62
Zm00001d028567_P001	Maize	mitochondrion	51.33	52.53
TraesCS4B01G210900.3	Wheat	cytosol	52.09	50.74
CDY41035	Canola	cytosol, mitochondrion	45.25	46.94
CDY26685	Canola	cytosol, mitochondrion	44.68	46.35
Zm00001d047837_P003	Maize	cytosol	44.87	46.0
CDX83776	Canola	cytosol	43.73	45.01
CDX96669	Canola	cytosol	42.97	44.23
CDX75603	Canola	mitochondrion	47.34	42.06
CDX69251	Canola	mitochondrion, nucleus	47.34	41.71
CDY18615	Canola	cytosol	27.76	41.6
CDX81385	Canola	cytosol	31.94	35.52
CDX81383	Canola	cytosol	30.61	33.75
CDY18616	Canola	nucleus	30.8	32.27
CDY47008	Canola	cytosol, nucleus, peroxisome	27.19	31.22
CDX81381	Canola	cytosol	30.42	31.13
CDX81382	Canola	cytosol	30.04	30.44
CDY45247	Canola	cytosol	31.56	26.9
CDY54205	Canola	cytosol	31.75	26.13
CDY54207	Canola	extracellular, plasma membrane	32.32	25.3
CDY54206	Canola	cytosol	19.96	24.25

Protein Annotations

EnsemblPlants:CDY20486	EnsemblPlantsGene:GSBRNA2T00012585001	Gene3D:2.10.110.10	GO:A0A078G4Y2	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:DA1-like	InterPro:IPR001781	InterPro:Znf_LIM	PANTHER:PTHR24209	PANTHER:PTHR24209:SF22
PFAM:PF00412	PFAM:PF12315	PFscan:PS50023	ProteinID:CDY20486	ProteinID:CDY20486.1	ScanProsite:PS00478
SEG:seg	SMART:SM00132	UniParc:UPI0004EE1E3D	UniProt:A0A078G4Y2	MapMan:19.2.2.1.7	:

Description

BnaC04g05580DBnaC04g05580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4Y2]

Coordinates

chrLK032108:-:449737..454303

Molecular Weight (calculated)

59506.3 Da

IEP (calculated)

8.089

GRAVY (calculated)

-0.611

Length

526 amino acids

Sequence
(BLAST)

001: MDSSSSSSSS SSYGVAHVSH ISNPCIFGEA GSSSSSTYRD KKWNLMKWVG KLFKSGSSGG GARTNHHPPQ FQEDENMVFP LHPSSLDDRS RGARDKEEFD
101: RAMSLSRADD RRRPHGYGWS MDNNSDFPRP FHGGLNPPSF IPPYEPSYQF RRRQSRICGG CNRDIGMGNY LGCMGTFFHP ECFCCHSCRY PITEHEFSLS
201: GTKPYHKICF KELTHPKCEV CHHFIPTNDA GLIEYRCHPF WNQKYCPSHE YDKTARCCSC ERLESWDVRY YTLEDGRSLC LECMETAITD TGDCQPLYHS
301: IRDYYEGMYM KLEQQIPMLL VQREALNDAI VGEKNGYHHM PETRGLCLSE EQTVTSVLKR PRLGAHRLVG MRTQPRKLTR KCEVTAILVL YGLPRLLTGA
401: ILAHELMHGW LRLKGYRNLN PEVEEGICQV LSYMWLESEV LSDPLSRNVP STSSSGATSS SSSSFSNKKG GKSNVEKKLG EFFKHQIAHD ASPAYGGGFR
501: SANAAVSKYG LHRTLDHIRF TGTFPL

Best Arabidopsis Sequence Match ( AT2G39830.1 )
(BLAST)

001: MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS NGGGSGAHTN HHPPQFQEDE NMVFPLPPSS LDDRSRGARD
101: KEELDRSISL SLADNTKRPH GYGWSMDNNR DFPRPFHGGL NPSSFIPPYE PSYQYRRRQR ICGGCNSDIG SGNYLGCMGT FFHPECFRCH SCGYAITEHE
201: FSLSGTKPYH KLCFKELTHP KCEVCHHFIP TNDAGLIEYR CHPFWNQKYC PSHEYDKTAR CCSCERLESW DVRYYTLEDG RSLCLECMET AITDTGECQP
301: LYHAIRDYYE GMYMKLDQQI PMLLVQREAL NDAIVGEKNG YHHMPETRGL CLSEEQTVTS VLRRPRLGAH RLVGMRTQPQ RLTRKCEVTA ILVLYGLPRL
401: LTGAILAHEL MHGWLRLNGF RNLNPEVEEG ICQVLSYMWL ESEVLSDPST RNLPSTSSVA TSSSSSFSNK KGGKSNVEKK LGEFFKHQIA HDASPAYGGG
501: FRAANAAACK YGLRRTLDHI RLTGTFPL

Arabidopsis Description

DAR2DA1-related protein 2 [Source:TAIR;Acc:AT2G39830]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.