CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	peroxisome
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81381	Canola	cytosol	76.89	75.1
AT5G66640.5	Thale cress	nucleus	55.18	57.47
CDX81382	Canola	cytosol	59.16	57.23
CDY18615	Canola	cytosol	38.84	55.56
CDX81383	Canola	cytosol	44.82	47.17
TraesCS2D01G016500.1	Wheat	cytosol	20.52	46.82
CDX81385	Canola	cytosol	42.83	45.45
GSMUA_Achr9P07650_001	Banana	cytosol	28.88	45.03
CDY47008	Canola	cytosol, nucleus, peroxisome	37.85	41.48
HORVU7Hr1G118120.1	Barley	cytosol	3.39	39.53
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	34.46	38.79
Os06t0182500-02	Rice	cytosol	36.85	38.07
GSMUA_Achr6P28210_001	Banana	cytosol	36.06	37.95
Os03t0626600-01	Rice	plasma membrane	36.45	37.27
TraesCS2B01G007700.1	Wheat	cytosol	37.25	37.1
TraesCS2D01G016900.1	Wheat	cytosol	37.25	37.1
TraesCSU01G007800.1	Wheat	cytosol	37.25	37.1
TraesCS5D01G072300.1	Wheat	nucleus	35.66	36.68
EES16286	Sorghum	cytosol	37.05	36.61
GSMUA_Achr4P23130_001	Banana	mitochondrion	34.86	36.53
TraesCS5A01G060800.1	Wheat	cytosol	35.46	36.48
Os12t0596800-01	Rice	plasma membrane	35.26	36.42
KXG19479	Sorghum	cytosol	36.85	36.13
Zm00001d035844_P004	Maize	cytosol	36.45	36.02
CDY45247	Canola	cytosol	43.82	35.66
CDY26685	Canola	cytosol, mitochondrion	35.86	35.5
CDY41035	Canola	cytosol, mitochondrion	35.66	35.31
Zm00001d033289_P001	Maize	cytosol	7.17	34.95
CDX83776	Canola	cytosol	35.46	34.83
CDY54205	Canola	cytosol	44.02	34.59
TraesCS5B01G071300.1	Wheat	mitochondrion	35.46	34.5
CDX96669	Canola	cytosol	35.06	34.44
Solyc01g105210.2.1	Tomato	extracellular	8.17	33.88
OQU91328	Sorghum	cytosol, mitochondrion	34.06	33.86
Zm00001d033297_P003	Maize	cytosol, mitochondrion	33.47	33.4
TraesCS4A01G245200.2	Wheat	cytosol	35.86	33.4
TraesCS4D01G069000.1	Wheat	cytosol	35.86	32.73
TraesCS4B01G070200.1	Wheat	cytosol	35.46	32.66
CDX75603	Canola	mitochondrion	38.45	32.6
CDY07633	Canola	plastid	33.07	32.36
CDX69251	Canola	mitochondrion, nucleus	38.25	32.16
CDY61785	Canola	plastid	32.87	31.98
CDY54207	Canola	extracellular, plasma membrane	41.63	31.1
CDX74829	Canola	cytosol, plastid	32.47	30.93
Solyc01g105200.2.1	Tomato	cytosol	9.96	30.86
CDY20486	Canola	cytosol, plastid	32.27	30.8
CDY54206	Canola	cytosol	26.1	30.25
Zm00001d030953_P001	Maize	plastid	32.27	28.88
PGSC0003DMT400032779	Potato	cytosol	11.95	28.44
PGSC0003DMT400032774	Potato	cytosol	16.14	28.42
Solyc01g105180.2.1	Tomato	cytosol	18.33	23.65
GSMUA_Achr9P07640_001	Banana	cytosol	6.77	21.79

Protein Annotations

MapMan:19.2.2.1.7	Gene3D:2.10.110.10	GO:A0A078G021	UniProt:A0A078G021	EnsemblPlants:CDY18616	ProteinID:CDY18616
ProteinID:CDY18616.1	ncoils:Coil	InterPro:DA1-like	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00005675001	InterPro:IPR001781	PFAM:PF00412	PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023
PANTHER:PTHR24209	PANTHER:PTHR24209:SF13	SMART:SM00132	SUPFAM:SSF57716	UniParc:UPI0004EF1DA0	InterPro:Znf_LIM
SEG:seg	:	:	:	:	:

Description

BnaA09g07790DBnaA09g07790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G021]

Coordinates

chrLK032087:+:189949..192517

Molecular Weight (calculated)

57246.8 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.662

Length

502 amino acids

Sequence
(BLAST)

001: MGWFSCFSPS TTQDDPSEDG IVRQRRERDY QAAIERAKEI SLKQFEKEEA ERSLQKSKEE GKREKVDDND DQVDDEQTQI DRATEKSLKE LEKEEAKRRL
101: EKSKEEGKRK QVEEEVDKGQ FKHSKDKEVA LPNICNGCKS EIKDGLSVNA LGDLWHPHCL CCLHCHKPIA GDEISRKGKV HRSCYKEHRH PTCCVCQNKI
201: PSTDKGIVFS EHPFWKEKYC PCHDSDGTAK CCSCERLEPR GTNFVLLSDD RWLCLQCMES SVMDTYECHD LHLEIREFFD GLFLPVDKEF PLLLVEKQAL
301: NKAEQEEKID YHYAVVTRGI CLSEDQNVAS VKERPKMANN KLIDIVTETQ MVSGSAVTAI LIIYGLPRLL TGYILAHEMM HAYLRLKGYK NLKLELEEGL
401: CQVLGLRWLE SQTFASSDAA AASSSSSRTP PAASTSSKKG DDWSDYEKKL VEFCIHQIKE DDSPVYGLGF KQVHKIWVSN HSLTDTLKVI VNASKNVPVS
501: KF

Best Arabidopsis Sequence Match ( AT5G66640.1 )
(BLAST)

001: MVRRKRQEED EKIEIERVKE ESLKLAKQAE EKRRLEESKE QGKRIQVDDD QLAKTTSKDK GQINHSKDVV EEDVNPPPSI DGKSEIGDGT SVNPRCLCCF
101: HCHRPFVMHE ILKKGKFHID CYKEYYRNRN CYVCQQKIPV NAEGIRKFSE HPFWKEKYCP IHDEDGTAKC CSCERLEPRG TNYVMLGDFR WLCIECMGSA
201: VMDTNEVQPL HFEIREFFEG LFLKVDKEFA LLLVEKQALN KAEEEEKIDY HRAAVTRGLC MSEEQIVPSI IKGPRMGPDN QLITDIVTES QRVSGFEVTG
301: ILIIYGLPRL LTGYILAHEM MHAWLRLNGY KNLKLELEEG LCQALGLRWL ESQTFASTDA AAAAAVASSS SFSSSTAPPA AITSKKSDDW SIFEKKLVEF
401: CMNQIKEDDS PVYGLGFKQV YEMMVSNNYN IKDTLKDIVS ASNATPDSTV

Arabidopsis Description

DAR3DA1-related protein 3 [Source:TAIR;Acc:AT5G66640]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.