Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- nucleus 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400032774 | Potato | cytosol | 65.43 | 37.19 |
| Solyc01g105180.2.1 | Tomato | cytosol | 56.79 | 23.65 |
| GSMUA_Achr9P07650_001 | Banana | cytosol | 32.72 | 16.46 |
| Zm00001d033289_P001 | Maize | cytosol | 9.88 | 15.53 |
| CDY18615 | Canola | cytosol | 30.25 | 13.96 |
| GSMUA_Achr7P00700_001 | Banana | endoplasmic reticulum | 36.42 | 13.23 |
| Bra037160.1-P | Field mustard | cytosol | 30.86 | 12.82 |
| GSMUA_Achr6P28210_001 | Banana | cytosol | 37.04 | 12.58 |
| Os06t0182500-02 | Rice | cytosol | 36.42 | 12.14 |
| Os12t0596800-01 | Rice | plasma membrane | 36.42 | 12.14 |
| Solyc04g079840.2.1 | Tomato | cytosol | 36.42 | 12.14 |
| Zm00001d035844_P004 | Maize | cytosol | 37.65 | 12.01 |
| Solyc02g089930.2.1 | Tomato | cytosol | 37.65 | 11.84 |
| Os03t0626600-01 | Rice | plasma membrane | 35.8 | 11.81 |
| GSMUA_Achr4P23130_001 | Banana | mitochondrion | 34.57 | 11.69 |
| TraesCS5A01G060800.1 | Wheat | cytosol | 35.19 | 11.68 |
| TraesCS5D01G072300.1 | Wheat | nucleus | 35.19 | 11.68 |
| EES16286 | Sorghum | cytosol | 36.42 | 11.61 |
| KXG19479 | Sorghum | cytosol | 36.42 | 11.52 |
| Zm00001d033297_P003 | Maize | cytosol, mitochondrion | 35.19 | 11.33 |
| TraesCS4A01G245200.2 | Wheat | cytosol | 37.65 | 11.32 |
| TraesCS2B01G007700.1 | Wheat | cytosol | 35.19 | 11.31 |
| TraesCS2D01G016900.1 | Wheat | cytosol | 35.19 | 11.31 |
| TraesCSU01G007800.1 | Wheat | cytosol | 35.19 | 11.31 |
| OQU91328 | Sorghum | cytosol, mitochondrion | 35.19 | 11.29 |
| TraesCS4B01G070200.1 | Wheat | cytosol | 37.65 | 11.19 |
| TraesCS4D01G069000.1 | Wheat | cytosol | 37.65 | 11.09 |
| TraesCS5B01G071300.1 | Wheat | mitochondrion | 35.19 | 11.05 |
| Zm00001d030953_P001 | Maize | plastid | 37.04 | 10.7 |
| CDX81385 | Canola | cytosol | 30.86 | 10.57 |
| CDX81383 | Canola | cytosol | 30.86 | 10.48 |
| CDY18616 | Canola | nucleus | 30.86 | 9.96 |
| Solyc05g052910.2.1 | Tomato | plastid | 30.86 | 9.92 |
| AT5G66640.5 | Thale cress | nucleus | 29.01 | 9.75 |
| CDY47008 | Canola | cytosol, nucleus, peroxisome | 26.54 | 9.39 |
| CDX81381 | Canola | cytosol | 29.01 | 9.14 |
| Bra037159.1-P | Field mustard | cytosol | 29.01 | 9.11 |
| Solyc03g079910.2.1 | Tomato | cytosol | 30.86 | 9.11 |
| TraesCS2D01G016500.1 | Wheat | cytosol | 12.35 | 9.09 |
| AT5G66610.2 | Thale cress | cytosol | 32.72 | 9.03 |
| CDX81382 | Canola | cytosol | 28.4 | 8.86 |
| CDY45247 | Canola | cytosol | 32.72 | 8.59 |
| AT5G66620.1 | Thale cress | cytosol | 33.95 | 8.54 |
| CDY54207 | Canola | extracellular, plasma membrane | 35.19 | 8.48 |
| CDY54205 | Canola | cytosol | 32.72 | 8.29 |
| AT5G66630.1 | Thale cress | cytosol | 30.25 | 6.98 |
| HORVU7Hr1G118120.1 | Barley | cytosol | 1.85 | 6.98 |
| CDY54206 | Canola | cytosol | 16.67 | 6.24 |
| Solyc01g105210.2.1 | Tomato | extracellular | 4.32 | 5.79 |
| GSMUA_Achr9P07640_001 | Banana | cytosol | 2.47 | 2.56 |
Protein Annotations
| EnsemblPlants:Solyc01g105200.2.1 | EnsemblPlantsGene:Solyc01g105200.2 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR24209 |
| PANTHER:PTHR24209:SF13 | TMHMM:TMhelix | UniParc:UPI0002768D8C | UniProt:K4B290 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr1:+:93458357..93460308
Molecular Weight (calculated)
18987.2 Da
IEP (calculated)
8.162
GRAVY (calculated)
-0.188
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLSTSFWRK SRKRCNILVC DVCEEEICSD WSRCTYWGQT YCEKHTSDGT PQCCSCSRLK IGDLKYIILN DGRKLCPDCH YTAVTDPGDC KPLLDEVHRF
101: FKGMNMKIRY YIPILLVDEK EMIKNVEKVG RTGDYISKWI LLLPSHFVVV IVFGWFHRHH LA
101: FKGMNMKIRY YIPILLVDEK EMIKNVEKVG RTGDYISKWI LLLPSHFVVV IVFGWFHRHH LA
001: MWCVPCCFKP STSEDRFEAE TIHVIEVSQH EADIQKAKQR SLATHEAEKL DLATHEAEQL DLAIQEFSRQ EEEEERRRTR ELENDAQIAN VLQHEERERL
101: INKKTALEDE EDELLARTLE ESLKENNRRK MFEEQVNKDE QLALIVQESL NMEEYPIRLE EYKSISRRAP LDVDEQFAKA VKESLKNKGK GKQFEDEQVK
201: KDEQLALIVQ ESLNMVESPP RLEENNNIST RAPVDEDEQL AKAVEESLKG KGQIKQSKDE VEGDGMLLEL NPPPSLCGGC NFAVEHGGSV NILGVLWHPG
301: CFCCRACHKP IAIHDIENHV SNSRGKFHKS CYERYCYVCK EKKMKTYNNH PFWEERYCPV HEADGTPKCC SCERLEPRES NYVMLADGRW LCLECMNSAV
401: MDSDECQPLH FDMRDFFEGL NMKIEKEFPF LLVEKQALNK AEKEEKIDYQ YEVVTRGICL SEEQIVDSVS QRPVRGPNNK LVGMATESQK VTNRIYFGSR
501: DDACLS
101: INKKTALEDE EDELLARTLE ESLKENNRRK MFEEQVNKDE QLALIVQESL NMEEYPIRLE EYKSISRRAP LDVDEQFAKA VKESLKNKGK GKQFEDEQVK
201: KDEQLALIVQ ESLNMVESPP RLEENNNIST RAPVDEDEQL AKAVEESLKG KGQIKQSKDE VEGDGMLLEL NPPPSLCGGC NFAVEHGGSV NILGVLWHPG
301: CFCCRACHKP IAIHDIENHV SNSRGKFHKS CYERYCYVCK EKKMKTYNNH PFWEERYCPV HEADGTPKCC SCERLEPRES NYVMLADGRW LCLECMNSAV
401: MDSDECQPLH FDMRDFFEGL NMKIEKEFPF LLVEKQALNK AEKEEKIDYQ YEVVTRGICL SEEQIVDSVS QRPVRGPNNK LVGMATESQK VTNRIYFGSR
501: DDACLS
Arabidopsis Description
DAR6Protein DA1-related 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.