CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035844_P004	Maize	cytosol	95.51	96.26
Os06t0182500-02	Rice	cytosol	86.33	90.95
TraesCS2D01G016500.1	Wheat	cytosol	39.06	90.91
TraesCS2B01G007700.1	Wheat	cytosol	85.35	86.71
HORVU2Hr1G002700.14	Barley	cytosol	85.35	86.71
TraesCS2D01G016900.1	Wheat	cytosol	85.16	86.51
TraesCSU01G007800.1	Wheat	cytosol	84.96	86.31
GSMUA_Achr9P07650_001	Banana	cytosol	51.37	81.68
GSMUA_Achr6P28210_001	Banana	cytosol	74.8	80.29
KRH33082	Soybean	cytosol	13.09	74.44
VIT_18s0001g11820.t01	Wine grape	cytosol	69.53	74.32
VIT_04s0023g01030.t01	Wine grape	cytosol	67.97	71.31
Solyc04g079840.2.1	Tomato	cytosol	66.8	70.37
PGSC0003DMT400043506	Potato	cytosol	66.41	69.96
Solyc02g089930.2.1	Tomato	cytosol	68.75	68.35
PGSC0003DMT400026022	Potato	cytosol	68.16	67.64
KRH05774	Soybean	cytosol	61.13	65.48
GSMUA_Achr9P07640_001	Banana	cytosol	19.92	65.38
KRH15264	Soybean	cytosol	61.33	65.01
Bra016514.1-P	Field mustard	cytosol	56.45	62.55
KRH08326	Soybean	cytosol	64.45	62.38
CDY41035	Canola	cytosol, mitochondrion	61.13	61.74
KRH76891	Soybean	cytosol	65.62	61.54
CDY26685	Canola	cytosol, mitochondrion	60.94	61.54
EES16286	Sorghum	cytosol	60.55	61.02
KRH28579	Soybean	cytosol	66.21	60.21
CDX83776	Canola	cytosol	59.77	59.88
OQU91328	Sorghum	cytosol, mitochondrion	58.98	59.8
CDX96669	Canola	cytosol	59.57	59.69
Bra025725.1-P	Field mustard	cytosol, mitochondrion	61.13	59.39
AT1G19270.1	Thale cress	cytosol, mitochondrion	61.13	58.83
AT4G36860.3	Thale cress	cytosol	65.62	58.23
KRH69970	Soybean	cytosol	64.26	57.12
CDX75603	Canola	mitochondrion	65.62	56.76
CDX69251	Canola	mitochondrion, nucleus	65.82	56.45
Bra011712.1-P	Field mustard	cytosol, mitochondrion	65.82	56.35
VIT_04s0023g01040.t01	Wine grape	plasma membrane	62.3	54.91
KXG39715	Sorghum	endoplasmic reticulum	51.95	52.36
KRH26214	Soybean	cytosol	39.84	51.52
CDY18615	Canola	cytosol	34.38	50.14
Bra037160.1-P	Field mustard	cytosol	37.11	48.72
Solyc01g105210.2.1	Tomato	extracellular	10.94	46.28
CDX81385	Canola	cytosol	39.45	42.71
CDX81383	Canola	cytosol	37.3	40.04
AT5G66640.5	Thale cress	nucleus	35.35	37.55
CDY18616	Canola	nucleus	36.13	36.85
CDY47008	Canola	cytosol, nucleus, peroxisome	32.62	36.46
Solyc01g105200.2.1	Tomato	cytosol	11.52	36.42
PGSC0003DMT400032779	Potato	cytosol	14.84	36.02
PGSC0003DMT400032774	Potato	cytosol	19.73	35.44
CDX81381	Canola	cytosol	35.55	35.41
CDX81382	Canola	cytosol	34.77	34.3
Bra037159.1-P	Field mustard	cytosol	33.79	33.53
AT5G66610.2	Thale cress	cytosol	37.89	33.05
AT5G66620.1	Thale cress	cytosol	40.04	31.83
CDY45247	Canola	cytosol	37.11	30.79
CDY54205	Canola	cytosol	37.5	30.05
Solyc01g105180.2.1	Tomato	cytosol	21.88	28.79
VIT_18s0041g02180.t01	Wine grape	mitochondrion	37.5	27.83
CDY54206	Canola	cytosol	23.44	27.71
CDY54207	Canola	extracellular, plasma membrane	35.74	27.23
AT5G66630.1	Thale cress	cytosol	33.2	24.22
VIT_18s0041g02190.t01	Wine grape	cytosol	17.97	22.01

Protein Annotations

MapMan:19.2.2.1.7	Gene3D:2.10.110.10	UniProt:C5Z5H9	InterPro:DA1-like	ProteinID:EER87976.2	GO:GO:0000145
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	GO:GO:0046872	InterPro:IPR001781
InterPro:IPR003903	EnsemblPlants:KXG19479	ProteinID:KXG19479	ProteinID:KXG19479.1	PFAM:PF00412	PFAM:PF02809
PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023	PFscan:PS50330	PANTHER:PTHR24209	PANTHER:PTHR24209:SF11
SMART:SM00132	SMART:SM00726	EnsemblPlantsGene:SORBI_3010G064600	SUPFAM:SSF57716	InterPro:UIM_dom	UniParc:UPI0003C6B4B3
RefSeq:XP_002436609.1	InterPro:Znf_LIM	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:5107328..5114605

Molecular Weight (calculated)

57789.4 Da

IEP (calculated)

6.537

GRAVY (calculated)

-0.546

Length

512 amino acids

Sequence
(BLAST)

001: MGWLTKFFRG STHNISEGQY HSRPAEDTAW NEPSSSPVVT DIFSEFNNED IDRAIALSLS EEEQRKAKTI DKDMHLEEDE QLARAIQESL NVESPPRRNG
101: SANGGTTYHL PRETGNGGNA YQPSRENGSA NGGNAYHPLP FMFSSGFRAC AGCHREIGHG RFLSCMGAVW HPECFRCHAC SQPIYDYEFS MSGNHPYHKT
201: CYKEQFHPKC DVCKQFIPTN MNGLIEYRAH PFWLQKYCPS HEVDGTPRCC SCERMEPRES RYVLLDDGRK LCLECLDSAV MDTNECQPLY LEIQEFYEGL
301: NMKVEQQVPL LLVERQALNE AMEGEKAGHH HLPETRGLCL SEEQTVSTIL RRPRMAGNKI MGMITEPYRL TRRCEVTAIL ILYGLPRLLT GSILAHEMMH
401: AWLRLKGYRT LSPDVEEGIC QVLAHLWIES EIMAGSGSGA ASSSSGSSSS MSSKKAGRSQ FEHKLGDFFK HQIETDTSMA YGEGFRAGNR AVLQYGLKRT
501: LEHIRLTGTF PF

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.