CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33082	Soybean	cytosol	15.4	67.78
KRH08326	Soybean	cytosol	85.35	63.89
KRH69970	Soybean	cytosol	88.64	60.94
Zm00001d033289_P001	Maize	cytosol	13.89	53.4
KRH76891	Soybean	cytosol	69.44	50.37
GSMUA_Achr9P07640_001	Banana	cytosol	18.94	48.08
KRH28579	Soybean	cytosol	67.93	47.78
VIT_04s0023g01030.t01	Wine grape	cytosol	54.8	44.47
GSMUA_Achr6P28210_001	Banana	cytosol	53.03	44.03
PGSC0003DMT400026022	Potato	cytosol	55.3	42.44
Solyc02g089930.2.1	Tomato	cytosol	55.05	42.33
Os06t0182500-02	Rice	cytosol	51.77	42.18
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	46.46	41.26
TraesCS2B01G007700.1	Wheat	cytosol	51.52	40.48
TraesCSU01G007800.1	Wheat	cytosol	51.26	40.28
TraesCS2D01G016900.1	Wheat	cytosol	51.26	40.28
Zm00001d035844_P004	Maize	cytosol	51.52	40.16
KXG19479	Sorghum	cytosol	51.52	39.84
GSMUA_Achr4P23130_001	Banana	mitochondrion	47.47	39.25
GSMUA_Achr9P07650_001	Banana	cytosol	31.57	38.82
AT4G36860.3	Thale cress	cytosol	56.31	38.65
CDX75603	Canola	mitochondrion	56.82	38.01
Bra011712.1-P	Field mustard	cytosol, mitochondrion	57.07	37.79
CDX69251	Canola	mitochondrion, nucleus	56.82	37.69
Os03t0626600-01	Rice	plasma membrane	46.72	37.68
KRH15264	Soybean	cytosol	45.71	37.47
Os12t0596800-01	Rice	plasma membrane	45.96	37.45
KRH05774	Soybean	cytosol	45.2	37.45
TraesCS5D01G072300.1	Wheat	nucleus	45.96	37.3
TraesCS5A01G060800.1	Wheat	cytosol	45.96	37.3
OQU91328	Sorghum	cytosol, mitochondrion	46.72	36.63
EES16286	Sorghum	cytosol	46.46	36.22
Zm00001d033297_P003	Maize	cytosol, mitochondrion	45.71	35.98
TraesCS5B01G071300.1	Wheat	mitochondrion	45.96	35.27
VIT_04s0023g01040.t01	Wine grape	plasma membrane	49.49	33.73
TraesCS4A01G245200.2	Wheat	cytosol	45.2	33.21
TraesCS4B01G070200.1	Wheat	cytosol	44.95	32.66
TraesCS4D01G069000.1	Wheat	cytosol	44.44	32.0
TraesCS2D01G016500.1	Wheat	cytosol	17.42	31.36
KRG97826	Soybean	cytosol	33.84	30.45
KRH15044	Soybean	cytosol	36.36	28.57
Zm00001d030953_P001	Maize	plastid	40.15	28.34
KRH31044	Soybean	nucleus	36.36	28.29
KRH73095	Soybean	plastid	36.36	25.67

Protein Annotations

MapMan:19.2.2.1.7	Gene3D:2.10.110.10	UniProt:A0A0R0H662	EMBL:ACUP02007609	InterPro:DA1-like	EnsemblPlantsGene:GLYMA_12G160000
GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR001781	InterPro:IPR003903	EnsemblPlants:KRH26214
ProteinID:KRH26214	ProteinID:KRH26214.1	PFAM:PF00412	PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023
PFscan:PS50330	PANTHER:PTHR24209	PANTHER:PTHR24209:SF13	SMART:SM00132	SMART:SM00726	SUPFAM:SSF57716
InterPro:UIM_dom	UniParc:UPI0006ED6FD1	InterPro:Znf_LIM	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr12:+:28376204..28380326

Molecular Weight (calculated)

45148.3 Da

IEP (calculated)

4.602

GRAVY (calculated)

-0.538

Length

396 amino acids

Sequence
(BLAST)

001: MGWFTKLLKG SNRKSSGGRY HGKYEDDRIS DNLDCSAVIT LSSSNDLTDI EKEEIGRAIA LSLSEADKKG KKVIEDDSES EDDELCPLSD EEAESVGEVQ
101: QDEDDHHATI QQDEDKHLDE VQLEEDEQLA RAIQESLSIS SPPRSETDSL FQPLAHLFPP VYRICAGCNA EISHGRFLSC MGGYWHPECF CCHACKLPIT
201: DYEIPPNSAG LIEYRAHPFW LQKYCPSHER DGTPRCCSCQ RLESVDTKYL LLDDGRKLCL ECLDLAIMDT HECQPLYVEI QEFYEGLHMK MEQQVLMLLV
301: ERQALNEAME GEKNGHHHLP ETRGLCLSEE QNVPTILRRP RIGAGYQLID MITEPFRLVL CQRGKKKDTK YRYERSFWSV LVGYLLQIAT IGVEIP

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.