Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- cytosol 2
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH33082 | Soybean | cytosol | 15.7 | 77.78 |
| GSMUA_Achr9P07650_001 | Banana | cytosol | 55.83 | 77.33 |
| GSMUA_Achr4P23130_001 | Banana | mitochondrion | 72.87 | 67.85 |
| GSMUA_Achr6P28210_001 | Banana | cytosol | 71.97 | 67.3 |
| HORVU0Hr1G028930.1 | Barley | cytosol | 23.09 | 65.19 |
| VIT_04s0023g01030.t01 | Wine grape | cytosol | 68.83 | 62.91 |
| VIT_18s0001g11820.t01 | Wine grape | cytosol | 67.04 | 62.42 |
| Zm00001d033289_P001 | Maize | cytosol | 14.35 | 62.14 |
| Os12t0596800-01 | Rice | plasma membrane | 66.14 | 60.7 |
| Os03t0626600-01 | Rice | plasma membrane | 66.14 | 60.08 |
| HORVU5Hr1G016350.3 | Barley | cytosol | 65.02 | 59.43 |
| TraesCS5A01G060800.1 | Wheat | cytosol | 64.8 | 59.22 |
| TraesCS5D01G072300.1 | Wheat | nucleus | 64.8 | 59.22 |
| KRH05774 | Soybean | cytosol | 63.0 | 58.79 |
| PGSC0003DMT400043506 | Potato | cytosol | 63.9 | 58.64 |
| Solyc04g079840.2.1 | Tomato | cytosol | 63.9 | 58.64 |
| Solyc02g089930.2.1 | Tomato | cytosol | 67.26 | 58.25 |
| PGSC0003DMT400026022 | Potato | cytosol | 67.26 | 58.14 |
| EES16286 | Sorghum | cytosol | 65.7 | 57.68 |
| KRH15264 | Soybean | cytosol | 62.33 | 57.56 |
| KRH08326 | Soybean | cytosol | 67.49 | 56.9 |
| OQU91328 | Sorghum | cytosol, mitochondrion | 63.68 | 56.24 |
| TraesCS5B01G071300.1 | Wheat | mitochondrion | 64.8 | 56.01 |
| Zm00001d033297_P003 | Maize | cytosol, mitochondrion | 62.56 | 55.47 |
| KRH76891 | Soybean | cytosol | 66.82 | 54.58 |
| Bra016514.1-P | Field mustard | cytosol | 55.83 | 53.9 |
| CDY41035 | Canola | cytosol, mitochondrion | 60.54 | 53.25 |
| CDY26685 | Canola | cytosol, mitochondrion | 60.54 | 53.25 |
| KRH28579 | Soybean | cytosol | 66.37 | 52.58 |
| TraesCS4A01G245200.2 | Wheat | cytosol | 63.45 | 52.5 |
| KRH69970 | Soybean | cytosol | 67.49 | 52.26 |
| CDX83776 | Canola | cytosol | 59.87 | 52.25 |
| GSMUA_Achr5P07030_001 | Banana | cytosol | 54.93 | 52.24 |
| CDX96669 | Canola | cytosol | 59.64 | 52.05 |
| TraesCS4B01G070200.1 | Wheat | cytosol | 63.45 | 51.93 |
| TraesCS4D01G069000.1 | Wheat | cytosol | 63.23 | 51.27 |
| Bra025725.1-P | Field mustard | cytosol, mitochondrion | 60.54 | 51.23 |
| GSMUA_Achr10P... | Banana | mitochondrion | 53.81 | 50.85 |
| AT4G36860.3 | Thale cress | cytosol | 65.7 | 50.78 |
| AT1G19270.1 | Thale cress | cytosol, mitochondrion | 59.87 | 50.19 |
| VIT_04s0023g01040.t01 | Wine grape | plasma membrane | 65.25 | 50.09 |
| CDX75603 | Canola | mitochondrion | 65.92 | 49.66 |
| CDX69251 | Canola | mitochondrion, nucleus | 65.92 | 49.25 |
| Bra011712.1-P | Field mustard | cytosol, mitochondrion | 65.92 | 49.16 |
| HORVU4Hr1G011730.4 | Barley | cytosol | 62.56 | 47.94 |
| Solyc01g105210.2.1 | Tomato | extracellular | 12.78 | 47.11 |
| GSMUA_Achr8P19520_001 | Banana | cytosol | 50.0 | 46.95 |
| KRH26214 | Soybean | cytosol | 41.26 | 46.46 |
| CDY18615 | Canola | cytosol | 36.1 | 45.87 |
| Bra037160.1-P | Field mustard | cytosol | 38.56 | 44.1 |
| Zm00001d030953_P001 | Maize | plastid | 55.38 | 44.03 |
| CDX81385 | Canola | cytosol | 40.13 | 37.84 |
| CDX81383 | Canola | cytosol | 40.36 | 37.74 |
| PGSC0003DMT400032774 | Potato | cytosol | 23.99 | 37.54 |
| GSMUA_Achr9P07640_001 | Banana | cytosol | 13.0 | 37.18 |
| Solyc01g105200.2.1 | Tomato | cytosol | 13.23 | 36.42 |
| PGSC0003DMT400032779 | Potato | cytosol | 17.04 | 36.02 |
| CDY47008 | Canola | cytosol, nucleus, peroxisome | 35.65 | 34.72 |
| CDY18616 | Canola | nucleus | 38.79 | 34.46 |
| AT5G66640.5 | Thale cress | nucleus | 36.77 | 34.02 |
| CDX81381 | Canola | cytosol | 38.34 | 33.27 |
| Bra037159.1-P | Field mustard | cytosol | 37.89 | 32.75 |
| AT5G66610.2 | Thale cress | cytosol | 42.15 | 32.03 |
| CDX81382 | Canola | cytosol | 37.0 | 31.79 |
| AT5G66620.1 | Thale cress | cytosol | 42.6 | 29.5 |
| CDY45247 | Canola | cytosol | 40.36 | 29.17 |
| CDY54206 | Canola | cytosol | 28.03 | 28.87 |
| CDY54205 | Canola | cytosol | 40.81 | 28.48 |
| Solyc01g105180.2.1 | Tomato | cytosol | 24.22 | 27.76 |
| CDY54207 | Canola | extracellular, plasma membrane | 40.36 | 26.79 |
| VIT_18s0041g02180.t01 | Wine grape | mitochondrion | 41.03 | 26.52 |
| AT5G66630.1 | Thale cress | cytosol | 39.24 | 24.93 |
| VIT_18s0041g02190.t01 | Wine grape | cytosol | 17.94 | 19.14 |
Protein Annotations
| MapMan:19.2.2.1.7 | Gene3D:2.10.110.10 | InterPro:DA1-like | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 |
| EnsemblPlantsGene:GSMUA_Achr7G00700_001 | EnsemblPlants:GSMUA_Achr7P00700_001 | EnsemblPlants:GSMUA_Achr7T00700_001 | InterPro:IPR001781 | InterPro:IPR003903 | UniProt:M0TDL0 |
| PFAM:PF00412 | PFAM:PF12315 | ScanProsite:PS00478 | PFscan:PS50023 | PFscan:PS50330 | PANTHER:PTHR24209 |
| PANTHER:PTHR24209:SF11 | SMART:SM00132 | SUPFAM:SSF57716 | SignalP:SignalP-noTM | InterPro:UIM_dom | UniParc:UPI0002947EFF |
| InterPro:Znf_LIM | SEG:seg | : | : | : | : |
Description
Protein DA1-related 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G00700_001]
Coordinates
chr7:+:578144..583261
Molecular Weight (calculated)
51710.1 Da
IEP (calculated)
7.151
GRAVY (calculated)
-0.460
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLIFIYLKL LLGFNINGNH DISKLVHIQY FCFSAFTDRQ LDNKSHLEED EQLARAMQES LFTESPPHRN GQVYQPYPFF FPSFSRRCAG CNKEVGHGRY
101: LSVMGAVWHP ECFRCHECNK PIYDHEFSMY ENHPYHKSCY RKLFHPRCDV CKQFIPEIRD GRIEYRAHPF WGQKYCPLHE RDGTPRCCSC ERMESMDAKY
201: VTLDDGRKLC LECLNFSIMD TSECQPLYLD IQEFYEGLNM KVEQQIPLLL VERQALNEAM EGEKNGHHHL PETRGLCLSE EQIVRTILRR PIIGPGNRLI
301: DMITGPYRLV RRCEVTAILI LYGLPRLLTG SILAHEMMHA WLRLKGYRNL DPDVEEGICQ VLAHMWLDSE IISGSGSNAA SSSSTRPSKK GARTQTERKL
401: GEFFKHQIES DVSPEYGDGF RAANRAVDQY GLRRTLDHIS LTGRFP
101: LSVMGAVWHP ECFRCHECNK PIYDHEFSMY ENHPYHKSCY RKLFHPRCDV CKQFIPEIRD GRIEYRAHPF WGQKYCPLHE RDGTPRCCSC ERMESMDAKY
201: VTLDDGRKLC LECLNFSIMD TSECQPLYLD IQEFYEGLNM KVEQQIPLLL VERQALNEAM EGEKNGHHHL PETRGLCLSE EQIVRTILRR PIIGPGNRLI
301: DMITGPYRLV RRCEVTAILI LYGLPRLLTG SILAHEMMHA WLRLKGYRNL DPDVEEGICQ VLAHMWLDSE IISGSGSNAA SSSSTRPSKK GARTQTERKL
401: GEFFKHQIES DVSPEYGDGF RAANRAVDQY GLRRTLDHIS LTGRFP
001: MGWLTKILKG SSHKFSDGQC NGRYREDRNL EGPRYSAVSE LYCFLVHFEL KIKGFLEFLI QEGSDFDKEE IECAIALSLS EQEHVIPQDD KGKKIIEYKS
101: ETEEDDDDDE DEDEEYMRAQ LEAAEEEERR VAQAQIEEEE KRRAEAQLEE TEKLLAKARL EEEEMRRSKA QLEEDELLAK ALQESMNVGS PPRYDPGNIL
201: QPYPFLIPSS HRICVGCQAE IGHGRFLSCM GGVWHPECFC CNACDKPIID YEFSMSGNRP YHKLCYKEQH HPKCDVCHNF IPTNPAGLIE YRAHPFWMQK
301: YCPSHERDGT PRCCSCERME PKDTKYLILD DGRKLCLECL DSAIMDTHEC QPLYLEIREF YEGLHMKVEQ QIPMLLVERS ALNEAMEGEK HGHHHLPETR
401: GLCLSEEQTV TTVLRRPRIG AGYKLIDMIT EPCRLIRRCE VTAILILYGL PRLLTGSILA HEMMHAWLRL NGYPNLRPEV EEGICQVLAH MWLESETYAG
501: STLVDIASSS SSAVVSASSK KGERSDFEKK LGEFFKHQIE SDSSSAYGDG FRQGNQAVLK HGLRRTLDHI RLTGTFP
101: ETEEDDDDDE DEDEEYMRAQ LEAAEEEERR VAQAQIEEEE KRRAEAQLEE TEKLLAKARL EEEEMRRSKA QLEEDELLAK ALQESMNVGS PPRYDPGNIL
201: QPYPFLIPSS HRICVGCQAE IGHGRFLSCM GGVWHPECFC CNACDKPIID YEFSMSGNRP YHKLCYKEQH HPKCDVCHNF IPTNPAGLIE YRAHPFWMQK
301: YCPSHERDGT PRCCSCERME PKDTKYLILD DGRKLCLECL DSAIMDTHEC QPLYLEIREF YEGLHMKVEQ QIPMLLVERS ALNEAMEGEK HGHHHLPETR
401: GLCLSEEQTV TTVLRRPRIG AGYKLIDMIT EPCRLIRRCE VTAILILYGL PRLLTGSILA HEMMHAWLRL NGYPNLRPEV EEGICQVLAH MWLESETYAG
501: STLVDIASSS SSAVVSASSK KGERSDFEKK LGEFFKHQIE SDSSSAYGDG FRQGNQAVLK HGLRRTLDHI RLTGTFP
Arabidopsis Description
LIM domain-containing protein [Source:TAIR;Acc:AT4G36860]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.