CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037160.1-P	Field mustard	cytosol	97.15	87.44
CDX81385	Canola	cytosol	91.74	68.08
CDX81383	Canola	cytosol	74.36	54.72
HORVU7Hr1G118120.1	Barley	cytosol	5.7	46.51
GSMUA_Achr9P07650_001	Banana	cytosol	39.6	43.17
TraesCS2D01G016500.1	Wheat	cytosol	26.5	42.27
CDX81382	Canola	cytosol	60.97	41.23
CDY45247	Canola	cytosol	70.09	39.87
CDY54205	Canola	cytosol	71.79	39.44
CDY18616	Canola	nucleus	55.56	38.84
CDX81381	Canola	cytosol	56.41	38.52
CDY47008	Canola	cytosol, nucleus, peroxisome	49.29	37.77
Zm00001d033289_P001	Maize	cytosol	10.83	36.89
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	45.87	36.1
Os06t0182500-02	Rice	cytosol	49.86	36.01
TraesCS2D01G016900.1	Wheat	cytosol	50.43	35.12
TraesCSU01G007800.1	Wheat	cytosol	50.43	35.12
GSMUA_Achr6P28210_001	Banana	cytosol	47.58	35.01
TraesCS2B01G007700.1	Wheat	cytosol	50.14	34.92
Zm00001d035844_P004	Maize	cytosol	50.14	34.65
KXG19479	Sorghum	cytosol	50.14	34.38
AT5G66620.1	Thale cress	cytosol	62.68	34.16
Os03t0626600-01	Rice	plasma membrane	47.58	34.01
GSMUA_Achr4P23130_001	Banana	mitochondrion	45.87	33.61
CDY41035	Canola	cytosol, mitochondrion	48.43	33.53
CDY26685	Canola	cytosol, mitochondrion	48.43	33.53
TraesCS5A01G060800.1	Wheat	cytosol	45.58	32.79
CDY54207	Canola	extracellular, plasma membrane	62.39	32.59
TraesCS5D01G072300.1	Wheat	nucleus	45.3	32.58
Os12t0596800-01	Rice	plasma membrane	45.01	32.51
EES16286	Sorghum	cytosol	46.44	32.09
CDX96669	Canola	cytosol	45.87	31.51
CDX83776	Canola	cytosol	45.58	31.31
Zm00001d033297_P003	Maize	cytosol, mitochondrion	44.44	31.01
TraesCS5B01G071300.1	Wheat	mitochondrion	45.58	31.01
OQU91328	Sorghum	cytosol, mitochondrion	44.44	30.89
CDX75603	Canola	mitochondrion	51.28	30.41
CDX69251	Canola	mitochondrion, nucleus	51.57	30.32
Solyc01g105200.2.1	Tomato	cytosol	13.96	30.25
CDY61785	Canola	plastid	43.59	29.65
CDY54206	Canola	cytosol	36.47	29.56
CDY07633	Canola	plastid	42.73	29.24
AT5G66630.1	Thale cress	cytosol	56.41	28.21
TraesCS4A01G245200.2	Wheat	cytosol	43.02	28.01
CDY20486	Canola	cytosol, plastid	41.6	27.76
TraesCS4B01G070200.1	Wheat	cytosol	43.02	27.71
CDX74829	Canola	cytosol, plastid	41.6	27.7
TraesCS4D01G069000.1	Wheat	cytosol	43.02	27.45
Zm00001d030953_P001	Maize	plastid	40.17	25.13
Solyc01g105210.2.1	Tomato	extracellular	8.26	23.97
PGSC0003DMT400032774	Potato	cytosol	19.37	23.86
PGSC0003DMT400032779	Potato	cytosol	12.82	21.33
Solyc01g105180.2.1	Tomato	cytosol	22.22	20.05
GSMUA_Achr9P07640_001	Banana	cytosol	7.12	16.03

Protein Annotations

EnsemblPlants:CDY18615	EnsemblPlantsGene:GSBRNA2T00005673001	Gene3D:2.10.110.10	GO:A0A078FW36	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:DA1-like	InterPro:IPR001781	InterPro:Znf_LIM	PANTHER:PTHR24209	PANTHER:PTHR24209:SF13
PFAM:PF00412	PFAM:PF12315	PFscan:PS50023	ProteinID:CDY18615	ProteinID:CDY18615.1	ScanProsite:PS00478
SEG:seg	SMART:SM00132	UniParc:UPI0004EE57A8	UniProt:A0A078FW36	MapMan:19.2.2.1.7	:

Description

BnaA09g07800DBnaA09g07800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FW36]

Coordinates

chrLK032087:+:184238..186916

Molecular Weight (calculated)

39643.2 Da

IEP (calculated)

5.880

GRAVY (calculated)

-0.435

Length

351 amino acids

Sequence
(BLAST)

001: MGCFCFKPST SERIIWESLK DKGQTKPSED EVIPPRSKCG GCHSEIEQGG SVDVFGVPWH PECFSCGACR NPIAVHEVQN HVSNSRGKFH KNCYNRYCYV
101: CQEKVKIREY NSHPFWKEIY CPAHETDGTP KCCSCERLEP RETEFVMLDD GRWLCLECMD SAVMDTDEVQ PLHFEIRDFF HGLFLPVEKE FSLLLVEKQA
201: LNKAEEEEKI DNQHGVVTRG ICLSEEQIVT NVSKGPKMGE NKQLTGKTTE SQRVVSGCPV TAILILYGLP RLLTGSIMAH EMMHAYLRLN GHNNLDKVLE
301: EGICQVLGHM WLETQRYAPI DVAAASSSSS SSSNAAKKGE WSELEKKLVD F

Best Arabidopsis Sequence Match ( AT5G66610.3 )
(BLAST)

001: MVQESLYMVE LSAQLEEDKN ISTIPPLNED AQLQKVIWES AKGKGQIEHF KDPVEEDGNL PRVDLNVNHP HSICDGCKSA IEYGRSVHAL GVNWHPECFC
101: CRYCDKPIAM HEFSNTKGRC HITCYERSHP NCHVCKKKFP GRKYKEHPFW KEKYCPFHEV DGTPKCCSCE RLEPWGTKYV MLADNRWLCV KCMECAVMDT
201: YECQPLHFEI REFFGSLNMK VEKEFPLLLV EKEALKKAEA QEKIDNQHGV VTRGICLSEG QIVNSVFKKP TMGPNGELVS LGTEPQKVVG GCEVTAILIL
301: YGLPRLLTGY ILAHEMMHAW LRLNGYRNLK LELEEGICQV LGHMWLESQT YSSSAAASSA SSSSRTPAAN ASKKGAQSDY EKKLVEFCKD QIETDDSPVY
401: GVGFRKVNQM VSDSSLHKIL KSIQHWTKPD SNL

Arabidopsis Description

DAR7DA1-related protein 7 [Source:UniProtKB/TrEMBL;Acc:F4K0N7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.