Factsheet for TraesCS4B01G070200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G245200.2	Wheat	cytosol	96.15	97.22
TraesCS4D01G069000.1	Wheat	cytosol	97.25	96.36
HORVU4Hr1G011730.4	Barley	cytosol	92.84	86.94
OQU91328	Sorghum	cytosol, mitochondrion	66.06	71.29
Os03t0626600-01	Rice	plasma membrane	63.49	70.47
Zm00001d033297_P003	Maize	cytosol, mitochondrion	64.77	70.18
KRH33082	Soybean	cytosol	11.19	67.78
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	51.93	63.45
TraesCS5B01G071300.1	Wheat	mitochondrion	59.08	62.4
Zm00001d033289_P001	Maize	cytosol	11.19	59.22
VIT_04s0023g01030.t01	Wine grape	cytosol	52.84	59.02
PGSC0003DMT400043506	Potato	cytosol	51.56	57.82
Solyc04g079840.2.1	Tomato	cytosol	51.38	57.61
VIT_18s0001g11820.t01	Wine grape	cytosol	50.46	57.41
TraesCS2B01G007700.1	Wheat	cytosol	53.03	57.34
Solyc02g089930.2.1	Tomato	cytosol	53.39	56.5
PGSC0003DMT400026022	Potato	cytosol	53.39	56.4
GSMUA_Achr4P23130_001	Banana	mitochondrion	49.36	56.16
KRH05774	Soybean	cytosol	48.07	54.81
KRH08326	Soybean	cytosol	52.66	54.25
KRH76891	Soybean	cytosol	54.31	54.21
KRH15264	Soybean	cytosol	47.34	53.42
KRH28579	Soybean	cytosol	54.31	52.58
Bra016514.1-P	Field mustard	cytosol	44.04	51.95
CDY41035	Canola	cytosol, mitochondrion	46.61	50.1
CDY26685	Canola	cytosol, mitochondrion	46.42	49.9
CDX83776	Canola	cytosol	46.42	49.51
KRH69970	Soybean	cytosol	52.29	49.48
AT4G36860.3	Thale cress	cytosol	52.11	49.22
CDX96669	Canola	cytosol	46.05	49.12
AT1G19270.1	Thale cress	cytosol, mitochondrion	47.16	48.31
Bra025725.1-P	Field mustard	cytosol, mitochondrion	46.42	48.01
CDX75603	Canola	mitochondrion	51.93	47.8
CDX69251	Canola	mitochondrion, nucleus	51.74	47.24
Bra011712.1-P	Field mustard	cytosol, mitochondrion	51.74	47.16
Solyc01g105210.2.1	Tomato	extracellular	10.46	47.11
VIT_04s0023g01040.t01	Wine grape	plasma membrane	49.17	46.13
TraesCS4B01G210900.3	Wheat	cytosol	44.59	45.0
KRH26214	Soybean	cytosol	32.66	44.95
Bra037160.1-P	Field mustard	cytosol	30.83	43.08
CDY18615	Canola	cytosol	27.71	43.02
PGSC0003DMT400032774	Potato	cytosol	20.0	38.25
Solyc01g105200.2.1	Tomato	cytosol	11.19	37.65
CDX81383	Canola	cytosol	32.66	37.32
CDX81385	Canola	cytosol	31.56	36.36
PGSC0003DMT400032779	Potato	cytosol	13.76	35.55
CDY18616	Canola	nucleus	32.66	35.46
AT5G66640.5	Thale cress	nucleus	30.46	34.44
Bra037159.1-P	Field mustard	cytosol	31.93	33.72
CDX81381	Canola	cytosol	31.74	33.66
CDY47008	Canola	cytosol, nucleus, peroxisome	27.89	33.19
CDX81382	Canola	cytosol	30.46	31.98
AT5G66610.2	Thale cress	cytosol	33.39	31.01
CDY45247	Canola	cytosol	33.76	29.82
Solyc01g105180.2.1	Tomato	cytosol	21.28	29.82
AT5G66620.1	Thale cress	cytosol	34.5	29.19
CDY54205	Canola	cytosol	34.13	29.11
CDY54207	Canola	extracellular, plasma membrane	32.84	26.64
CDY54206	Canola	cytosol	20.55	25.87
VIT_18s0041g02180.t01	Wine grape	mitochondrion	32.29	25.51
AT5G66630.1	Thale cress	cytosol	31.19	24.22
VIT_18s0041g02190.t01	Wine grape	cytosol	15.41	20.1

Protein Annotations

EnsemblPlants:TraesCS4B01G070200.1	EnsemblPlantsGene:TraesCS4B01G070200	Gene3D:2.10.110.10	InterPro:DA1-like	InterPro:IPR001781	InterPro:IPR003903
InterPro:UIM_dom	InterPro:Znf_LIM	PANTHER:PTHR24209	PANTHER:PTHR24209:SF12	PFAM:PF00412	PFAM:PF12315
PFscan:PS50023	PFscan:PS50330	ScanProsite:PS00478	SEG:seg	SMART:SM00132	SMART:SM00726
SUPFAM:SSF57716	TIGR:cd09396	MapMan:19.2.2.1.7	:	:	:

Description

No Description!

Coordinates

chr4B:-:64107031..64112687

Molecular Weight (calculated)

61466.2 Da

IEP (calculated)

7.108

GRAVY (calculated)

-0.549

Length

545 amino acids

Sequence
(BLAST)

001: MHKMSRHPPR DRHPPKDRHH LVNKIDFHHR VDKMDLHPPI KKYMGWLSKV VKSSVNKVIR GQYDGNFSEG YSTQHATSHG THASDNEDID RAIALSLSEE
101: GQRKGKAIDT DDHLEEDEEL ARALQESLKD KHPLRQKIPV GGVHSDSTPA TSLLPDILPS SRSRVCAGCK TPLGHGQFLS CMDSVWHPRC FRCSACSEPI
201: SDSEFAVHED HPYHSTCYKE NFHPKCDVCK NFIRTNKNGL IEYRAHPFWM QKYCPSHDND GTPRCCSCER MEPKDIKYIT LDDGRKLCLE CLYTSIMDTD
301: ECQPVYIDIQ EFYEGLNMKV EQQIPLLLVE RQGLNEAREV EKMGHHLPET RGLCLSEEQI VRMISRRPII GPGSKMIDIS TAPYKLVRRC EVTAILVLYA
401: LPRLLTGYIL AHEMMHAYLR LKGYRIRNPE VEEGICQVLA HLWLESEIVS GSSSSIATTS EAAAVAAEAA VAAEATATPS STSSSAKKGE KTDFEKKLGE
501: FFKHQIETDP SAIYGDGFRA GIRAVERYGL RGTLDHIKRS GSFPS

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.