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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025725.1-P Field mustard cytosol, mitochondrion 87.59 88.42
CDY26685 Canola cytosol, mitochondrion 84.21 88.36
CDY41035 Canola cytosol, mitochondrion 84.21 88.36
CDX96669 Canola cytosol 80.45 83.76
CDX83776 Canola cytosol 80.08 83.37
Bra016514.1-P Field mustard cytosol 69.36 79.87
GSMUA_Achr9P07650_001 Banana cytosol 43.05 71.12
TraesCS2D01G016500.1 Wheat cytosol 29.32 70.91
VIT_18s0001g11820.t01 Wine grape cytosol 61.84 68.68
GSMUA_Achr6P28210_001 Banana cytosol 60.9 67.92
PGSC0003DMT400043506 Potato cytosol 59.02 64.61
KRH05774 Soybean cytosol 57.71 64.23
Os06t0182500-02 Rice cytosol 58.65 64.2
Solyc04g079840.2.1 Tomato cytosol 58.65 64.2
KRH15264 Soybean cytosol 57.71 63.56
TraesCS2B01G007700.1 Wheat cytosol 59.02 62.3
TraesCS2D01G016900.1 Wheat cytosol 58.65 61.9
TraesCSU01G007800.1 Wheat cytosol 58.46 61.71
Zm00001d035844_P004 Maize cytosol 58.83 61.61
KXG19479 Sorghum cytosol 58.83 61.13
GSMUA_Achr7P00700_001 Banana endoplasmic reticulum 50.19 59.87
GSMUA_Achr4P23130_001 Banana mitochondrion 51.69 57.41
Os03t0626600-01 Rice plasma membrane 50.75 54.99
Os12t0596800-01 Rice plasma membrane 50.19 54.94
EES16286 Sorghum cytosol 52.44 54.92
OQU91328 Sorghum cytosol, mitochondrion 51.88 54.65
Zm00001d033289_P001 Maize cytosol 10.53 54.37
TraesCS5A01G060800.1 Wheat cytosol 49.62 54.1
TraesCS5D01G072300.1 Wheat nucleus 49.62 54.1
Zm00001d033297_P003 Maize cytosol, mitochondrion 51.13 54.08
TraesCS5B01G071300.1 Wheat mitochondrion 49.62 51.16
AT4G36860.3 Thale cress cytosol 54.89 50.61
GSMUA_Achr9P07640_001 Banana cytosol 14.47 49.36
TraesCS4A01G245200.2 Wheat cytosol 48.12 47.5
TraesCS4B01G070200.1 Wheat cytosol 48.31 47.16
TraesCS4D01G069000.1 Wheat cytosol 48.5 46.91
Zm00001d030953_P001 Maize plastid 46.62 44.21
AT2G39830.2 Thale cress cytosol, plastid 43.23 43.31
AT5G66640.5 Thale cress nucleus 31.02 34.23
AT5G66610.2 Thale cress cytosol 35.53 32.2
AT5G66620.1 Thale cress cytosol 35.71 29.5
VIT_18s0041g02180.t01 Wine grape mitochondrion 35.9 27.68
AT5G66630.1 Thale cress cytosol 31.95 24.22
VIT_18s0041g02190.t01 Wine grape cytosol 16.92 21.53
Protein Annotations
MapMan:19.2.2.1.7Gene3D:2.10.110.10EntrezGene:838510UniProt:A0A178WC71ProteinID:AAF82237.1ProteinID:AEE29825.1
ProteinID:ANM58072.1ArrayExpress:AT1G19270EnsemblPlantsGene:AT1G19270RefSeq:AT1G19270TAIR:AT1G19270RefSeq:AT1G19270-TAIR-G
EnsemblPlants:AT1G19270.1TAIR:AT1G19270.1Unigene:At.21826EMBL:BX816571Symbol:DA1InterPro:DA1-like
GO:GO:0000003GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0006508
GO:GO:0007275GO:GO:0008150GO:GO:0008152GO:GO:0008233GO:GO:0008285GO:GO:0009653
GO:GO:0009791GO:GO:0009908GO:GO:0009987GO:GO:0016787GO:GO:0019538GO:GO:0040007
GO:GO:0043130GO:GO:0046621GO:GO:0046872GO:GO:0048317GO:GO:0048482GO:GO:1900057
InterPro:IPR001781InterPro:IPR003903RefSeq:NP_001320535.1RefSeq:NP_173361.1ProteinID:OAP15958.1UniProt:P0C7Q8
PFAM:PF00412PFAM:PF12315PO:PO:0000013PO:PO:0000037PO:PO:0000230PO:PO:0000293
PO:PO:0001016PO:PO:0001017PO:PO:0001052PO:PO:0001054PO:PO:0001078PO:PO:0001081
PO:PO:0004504PO:PO:0004507PO:PO:0007064PO:PO:0007098PO:PO:0007103PO:PO:0007115
PO:PO:0007123PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006
PO:PO:0009009PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009032PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020003PO:PO:0020021
PO:PO:0020030PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PO:PO:0025195
PO:PO:0025281ScanProsite:PS00478PFscan:PS50023PFscan:PS50330PANTHER:PTHR24209PANTHER:PTHR24209:SF7
SMART:SM00132SMART:SM00726SUPFAM:SSF57716InterPro:UIM_domUniParc:UPI0000162E0BInterPro:Znf_LIM
SEG:seg:::::
Description
DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
Coordinates
chr1:+:6662417..6666032
Molecular Weight (calculated)
60367.6 Da
IEP (calculated)
6.404
GRAVY (calculated)
-0.728
Length
532 amino acids
Sequence
(BLAST)
001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.