Factsheet for GSMUA_Achr9P07640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P28210_001	Banana	cytosol	82.69	27.04
VIT_18s0001g11820.t01	Wine grape	cytosol	65.38	21.29
Zm00001d035844_P004	Maize	cytosol	65.38	20.08
KXG19479	Sorghum	cytosol	65.38	19.92
Os06t0182500-02	Rice	cytosol	60.9	19.55
KRH26214	Soybean	cytosol	48.08	18.94
TraesCS2B01G007700.1	Wheat	cytosol	60.26	18.65
HORVU2Hr1G002700.14	Barley	cytosol	60.26	18.65
TraesCS2D01G016900.1	Wheat	cytosol	59.62	18.45
TraesCSU01G007800.1	Wheat	cytosol	58.97	18.25
PGSC0003DMT400043506	Potato	cytosol	56.41	18.11
VIT_04s0023g01030.t01	Wine grape	cytosol	55.77	17.83
Solyc04g079840.2.1	Tomato	cytosol	55.13	17.7
KRH15264	Soybean	cytosol	53.85	17.39
GSMUA_Achr4P23130_001	Banana	mitochondrion	53.21	17.33
KRH05774	Soybean	cytosol	52.56	17.15
PGSC0003DMT400026022	Potato	cytosol	55.13	16.67
Solyc02g089930.2.1	Tomato	cytosol	53.85	16.31
KRH08326	Soybean	cytosol	51.28	15.12
CDX83776	Canola	cytosol	49.36	15.07
KRH76891	Soybean	cytosol	52.56	15.02
KRH28579	Soybean	cytosol	53.21	14.74
CDX96669	Canola	cytosol	47.44	14.48
AT1G19270.1	Thale cress	cytosol, mitochondrion	49.36	14.47
CDY26685	Canola	cytosol, mitochondrion	46.79	14.4
CDY41035	Canola	cytosol, mitochondrion	46.79	14.4
Bra025725.1-P	Field mustard	cytosol, mitochondrion	47.44	14.04
KRH69970	Soybean	cytosol	50.0	13.54
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	37.18	13.0
AT4G36860.3	Thale cress	cytosol	48.08	13.0
Bra016514.1-P	Field mustard	cytosol	38.46	12.99
VIT_04s0023g01040.t01	Wine grape	plasma membrane	48.08	12.91
CDX75603	Canola	mitochondrion	48.08	12.67
CDX69251	Canola	mitochondrion, nucleus	48.08	12.56
Bra011712.1-P	Field mustard	cytosol, mitochondrion	46.79	12.21
GSMUA_Achr5P07030_001	Banana	cytosol	35.26	11.73
GSMUA_Achr10P...	Banana	mitochondrion	34.62	11.44
GSMUA_Achr8P19520_001	Banana	cytosol	33.97	11.16
VIT_18s0041g02190.t01	Wine grape	cytosol	23.08	8.61
CDY18615	Canola	cytosol	16.03	7.12
CDX81385	Canola	cytosol	21.15	6.98
CDY18616	Canola	nucleus	21.79	6.77
CDX81382	Canola	cytosol	22.44	6.74
Bra037160.1-P	Field mustard	cytosol	16.03	6.41
CDY47008	Canola	cytosol, nucleus, peroxisome	18.59	6.33
CDX81381	Canola	cytosol	19.23	5.84
CDX81383	Canola	cytosol	16.67	5.45
VIT_18s0041g02180.t01	Wine grape	mitochondrion	22.44	5.07
Bra037159.1-P	Field mustard	cytosol	16.67	5.04
CDY45247	Canola	cytosol	19.87	5.02
AT5G66620.1	Thale cress	cytosol	20.51	4.97
AT5G66610.2	Thale cress	cytosol	18.59	4.94
CDY54205	Canola	cytosol	19.23	4.69
AT5G66640.5	Thale cress	nucleus	14.1	4.56
CDY54207	Canola	extracellular, plasma membrane	17.95	4.17
CDY54206	Canola	cytosol	11.54	4.16
AT5G66630.1	Thale cress	cytosol	14.1	3.13
Solyc01g105200.2.1	Tomato	cytosol	2.56	2.47
Solyc01g105180.2.1	Tomato	cytosol	3.85	1.54
TraesCS2D01G016500.1	Wheat	cytosol	1.92	1.36
PGSC0003DMT400032774	Potato	cytosol	1.28	0.7
PGSC0003DMT400032779	Potato	cytosol	0.64	0.47
GSMUA_Achr9P07650_001	Banana	cytosol	0.64	0.31
Solyc01g105210.2.1	Tomato	extracellular	0.0	0.0
KRH33082	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.10.110.10	MapMan:35.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr9G07640_001	EnsemblPlants:GSMUA_Achr9P07640_001	EnsemblPlants:GSMUA_Achr9T07640_001	InterPro:IPR001781	InterPro:IPR003903	UniProt:M0TYC3
PFAM:PF00412	ScanProsite:PS00478	PFscan:PS50023	PFscan:PS50330	PANTHER:PTHR24209	PANTHER:PTHR24209:SF11
SMART:SM00132	SMART:SM00726	SUPFAM:SSF57716	InterPro:UIM_dom	UniParc:UPI00029594CE	InterPro:Znf_LIM

Description

Putative Protein DA1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G07640_001]

Coordinates

chr9:+:4886913..4890547

Molecular Weight (calculated)

17592.1 Da

IEP (calculated)

5.265

GRAVY (calculated)

-0.783

Length

156 amino acids

Sequence
(BLAST)

001: MGWLSRYFKG SSHRVSEGQY HGNYGDYGVW NERSSSWDAL SEYGNEDVDR AIAISLSEEE QKKAKATENA STLEEDEQLA RALQESLNAA SPPRENGHAF
101: QQAPLLFSSG FRICAGCNTE IGHGRFLSCM DAYWHPECFR CHACSQPISD YEARRK

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.