CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH08326	Soybean	cytosol	89.24	97.16
KRH33082	Soybean	cytosol	13.89	88.89
KRH26214	Soybean	cytosol	60.94	88.64
TraesCS2D01G016500.1	Wheat	cytosol	29.51	77.27
KRH76891	Soybean	cytosol	73.09	77.11
GSMUA_Achr9P07650_001	Banana	cytosol	42.88	76.71
KRH28579	Soybean	cytosol	71.7	73.36
VIT_04s0023g01030.t01	Wine grape	cytosol	61.81	72.95
GSMUA_Achr6P28210_001	Banana	cytosol	59.2	71.49
PGSC0003DMT400026022	Potato	cytosol	61.98	69.19
Solyc02g089930.2.1	Tomato	cytosol	61.46	68.74
Os06t0182500-02	Rice	cytosol	57.64	68.31
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	52.26	67.49
TraesCS2B01G007700.1	Wheat	cytosol	56.6	64.68
Zm00001d035844_P004	Maize	cytosol	56.94	64.57
TraesCSU01G007800.1	Wheat	cytosol	56.42	64.48
TraesCS2D01G016900.1	Wheat	cytosol	56.42	64.48
KXG19479	Sorghum	cytosol	57.12	64.26
KRH05774	Soybean	cytosol	51.91	62.55
AT4G36860.3	Thale cress	cytosol	61.98	61.87
GSMUA_Achr4P23130_001	Banana	mitochondrion	51.39	61.8
KRH15264	Soybean	cytosol	51.74	61.7
Os03t0626600-01	Rice	plasma membrane	52.43	61.51
Os12t0596800-01	Rice	plasma membrane	51.74	61.32
TraesCS5A01G060800.1	Wheat	cytosol	51.91	61.27
TraesCS5D01G072300.1	Wheat	nucleus	51.91	61.27
CDX75603	Canola	mitochondrion	62.67	60.98
Bra011712.1-P	Field mustard	cytosol, mitochondrion	62.85	60.54
CDX69251	Canola	mitochondrion, nucleus	62.67	60.47
OQU91328	Sorghum	cytosol, mitochondrion	51.91	59.21
EES16286	Sorghum	cytosol	52.08	59.06
TraesCS5B01G071300.1	Wheat	mitochondrion	51.91	57.95
Zm00001d033297_P003	Maize	cytosol, mitochondrion	50.35	57.65
KRG97826	Soybean	cytosol	42.53	55.68
Zm00001d033289_P001	Maize	cytosol	9.9	55.34
VIT_04s0023g01040.t01	Wine grape	plasma membrane	55.73	55.25
TraesCS4A01G245200.2	Wheat	cytosol	49.65	53.06
TraesCS4B01G070200.1	Wheat	cytosol	49.48	52.29
TraesCS4D01G069000.1	Wheat	cytosol	49.48	51.82
KRH15044	Soybean	cytosol	44.27	50.6
KRH31044	Soybean	nucleus	44.44	50.29
GSMUA_Achr9P07640_001	Banana	cytosol	13.54	50.0
Zm00001d030953_P001	Maize	plastid	46.18	47.42
KRH73095	Soybean	plastid	45.66	46.88

Protein Annotations

EntrezGene:100806605	MapMan:19.2.2.1.7	Gene3D:2.10.110.10	EMBL:ACUP02000741	InterPro:DA1-like	EnsemblPlantsGene:GLYMA_02G059900
GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	UniProt:I1JCT7	InterPro:IPR001781	InterPro:IPR003903
EnsemblPlants:KRH69970	ProteinID:KRH69970	ProteinID:KRH69970.1	PFAM:PF00412	PFAM:PF02809	PFAM:PF12315
ScanProsite:PS00478	PFscan:PS50023	PFscan:PS50330	PANTHER:PTHR24209	PANTHER:PTHR24209:SF13	SMART:SM00132
SMART:SM00726	SUPFAM:SSF57716	InterPro:UIM_dom	UniParc:UPI00023BDEC0	InterPro:Znf_LIM	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:5388494..5395213

Molecular Weight (calculated)

65293.7 Da

IEP (calculated)

5.242

GRAVY (calculated)

-0.545

Length

576 amino acids

Sequence
(BLAST)

001: MGWFTKLLKG SNRKSSGGRY HGKYEDDRIS DNLDCSADDL TDIEKEEIGR AIALSLSEAD KKGKKVIEDD SESEDDELCP LSDEEAESVG EVQQDEDDHH
101: AKIQQDEDKH LDEVQLEEDE QLARAIQESL SISSPPRSET DSLFQPFAHL FPPVYRICSG CNAEIGHGRF LSCMGGYWHP ECFCCHACKL PITDYEFSMS
201: GNRRYHKSCY KELHHPRCDV CKNFIPPNSA GLIEYRAHPF WLQKYCPSHE RDGTPRCCSC QRLEVSYIRS QNFFVIFCYQ QADTDVSHLS LLSLFLSFSF
301: PYETFRSVQS VDTKYLLLDD GRKLCLECLD SAIMDTHECQ PLYVEIQEFY EGLHMKIEQQ VPMLLVERQA LNEAMEGEKN GHHHLPETRG LCLSEEQTVP
401: TILRRPRIGA GYQLIDMITE PFRLVRRCEV TAILVLYGLP RLLTGSILAH EMMHAWLRLK GYGNLRPEVE EGICQVLAHM WLESEIIPGT GDEGASSSSS
501: SSSSSSSSSS PSSSSSSKKG KRSDFEKKLG KYFKHQIESD SSAAYGDGFR EGNQAVAKYG LRRTLDHIRL TGSFPY

Best Arabidopsis Sequence Match ( AT1G19270.1 )
(BLAST)

001: MGWFNKIFKG SNQRLRVGNN KHNHNVYYDN YPTASHDDEP SAADTDADND EPHHTQEPST SEDNTSNDQE NEDIDRAIAL SLLEENQEQT SISGKYSMPV
101: DEDEQLARAL QESMVVGNSP RHKSGSTYDN GNAYGAGDLY GNGHMYGGGN VYANGDIYYP RPITFQMDFR ICAGCNMEIG HGRFLNCLNS LWHPECFRCY
201: GCSQPISEYE FSTSGNYPFH KACYRERYHP KCDVCSHFIP TNHAGLIEYR AHPFWVQKYC PSHEHDATPR CCSCERMEPR NTRYVELNDG RKLCLECLDS
301: AVMDTMQCQP LYLQIQNFYE GLNMKVEQEV PLLLVERQAL NEAREGEKNG HYHMPETRGL CLSEEQTVST VRKRSKHGTG KWAGNITEPY KLTRQCEVTA
401: ILILFGLPRL LTGSILAHEM MHAWMRLKGF RTLSQDVEEG ICQVMAHKWL DAELAAGSTN SNAASSSSSS QGLKKGPRSQ YERKLGEFFK HQIESDASPV
501: YGDGFRAGRL AVHKYGLRKT LEHIQMTGRF PV

Arabidopsis Description

DA1DA1 [Source:UniProtKB/TrEMBL;Acc:A0A178WC71]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.