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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH28579 Soybean cytosol 95.79 92.9
KRH33082 Soybean cytosol 13.37 81.11
KRH08326 Soybean cytosol 77.11 79.58
TraesCS2D01G016500.1 Wheat cytosol 30.4 75.45
GSMUA_Achr9P07650_001 Banana cytosol 44.32 75.16
VIT_04s0023g01030.t01 Wine grape cytosol 66.12 73.98
KRH69970 Soybean cytosol 77.11 73.09
GSMUA_Achr6P28210_001 Banana cytosol 62.64 71.7
PGSC0003DMT400026022 Potato cytosol 66.12 69.96
Solyc02g089930.2.1 Tomato cytosol 65.93 69.9
Os06t0182500-02 Rice cytosol 61.9 69.55
KRH26214 Soybean cytosol 50.37 69.44
GSMUA_Achr7P00700_001 Banana endoplasmic reticulum 54.58 66.82
Zm00001d035844_P004 Maize cytosol 61.36 65.94
TraesCS2B01G007700.1 Wheat cytosol 60.62 65.67
KXG19479 Sorghum cytosol 61.54 65.62
TraesCS2D01G016900.1 Wheat cytosol 60.44 65.48
TraesCSU01G007800.1 Wheat cytosol 60.44 65.48
KRH05774 Soybean cytosol 56.59 64.64
KRH15264 Soybean cytosol 55.86 63.15
AT4G36860.3 Thale cress cytosol 66.12 62.56
GSMUA_Achr4P23130_001 Banana mitochondrion 54.58 62.21
CDX75603 Canola mitochondrion 67.4 62.16
Os03t0626600-01 Rice plasma membrane 55.86 62.12
Os12t0596800-01 Rice plasma membrane 55.13 61.93
CDX69251 Canola mitochondrion, nucleus 67.4 61.64
Bra011712.1-P Field mustard cytosol, mitochondrion 67.4 61.54
OQU91328 Sorghum cytosol, mitochondrion 56.41 60.99
TraesCS5D01G072300.1 Wheat nucleus 53.85 60.25
TraesCS5A01G060800.1 Wheat cytosol 53.85 60.25
EES16286 Sorghum cytosol 55.86 60.04
Zm00001d033297_P003 Maize cytosol, mitochondrion 54.95 59.64
Zm00001d033289_P001 Maize cytosol 10.81 57.28
TraesCS5B01G071300.1 Wheat mitochondrion 53.85 56.98
VIT_04s0023g01040.t01 Wine grape plasma membrane 58.97 55.42
TraesCS4A01G245200.2 Wheat cytosol 54.03 54.73
TraesCS4B01G070200.1 Wheat cytosol 54.21 54.31
KRG97826 Soybean cytosol 43.59 54.09
TraesCS4D01G069000.1 Wheat cytosol 54.03 53.64
GSMUA_Achr9P07640_001 Banana cytosol 15.02 52.56
KRH15044 Soybean cytosol 45.6 49.4
KRH31044 Soybean nucleus 45.05 48.33
Zm00001d030953_P001 Maize plastid 49.27 47.95
KRH73095 Soybean plastid 46.15 44.92
Protein Annotations
EntrezGene:100817969MapMan:19.2.2.1.7Gene3D:2.10.110.10EMBL:ACUP02000645ncoils:CoilInterPro:DA1-like
EnsemblPlantsGene:GLYMA_01G179800GO:GO:0003674GO:GO:0005488GO:GO:0046872UniProt:I1J903InterPro:IPR001781
InterPro:IPR003903EMBL:KR349314ProteinID:KRH76890.1EnsemblPlants:KRH76891ProteinID:KRH76891ProteinID:KRH76891.1
ProteinID:KRH76892.1PFAM:PF00412PFAM:PF12315ScanProsite:PS00478PFscan:PS50023PFscan:PS50330
PANTHER:PTHR24209PANTHER:PTHR24209:SF12SMART:SM00132SMART:SM00726SUPFAM:SSF57716InterPro:UIM_dom
UniParc:UPI0002336ECFInterPro:Znf_LIMSEG:seg:::
Description
hypothetical protein
Coordinates
chr1:-:51567436..51575214
Molecular Weight (calculated)
62592.0 Da
IEP (calculated)
5.473
GRAVY (calculated)
-0.659
Length
546 amino acids
Sequence
(BLAST)
001: MGWFTKLLKG SDYKILRGQY HGKYGEDRIW DNHHSSMDDL TDIEKEDIDR AIALSLSEED HKGKKVVDYD SQSEDEELCK IDDEEDEHLV KVHLEEEERL
101: AKIQQEEEER LAKIQQDERL AKIQQEDERL AKAQLEEDEQ LARAIQESLK IGSPPRYDND SSILSFPHLF PPGYRICAGC KTEIGQGRFL SCMGGVWHPE
201: CFCCHACHLP ITDYEFSMSS NRPYHKACYR EKHHPRCDVC KNFIPTNSSG LIEYRAHPFW LQKYCPSHEL DGTPRCCSCE RMESRDTKYL LLDDGRKLCL
301: ECLDSSIMDT HECQPLYLEI QEFYEGLNMK LEQQIPMLLV ERQALNEAME GEKNGHHHLP ETRGLCLSEE QTVTTISRRP RIGAGYRAID MITEPYRLIR
401: HCEVTAILVL YGLPRLLTGS ILAHEMMHAW LRLKGYPNLS PEVEEGICQV LAHMWLESEL YSGTGNDGAS SSASSSSSSS PSSSVSTKKG KRSDFEKKLG
501: EFFKHQIESD TSSAYGDGFR LGNQAMLKYG LKRTLDHIHM TGSFPY
Best Arabidopsis Sequence Match ( AT4G36860.1 )
(BLAST)
001: MGWLTKILKG SSHKFSDGQC NGRYREDRNL EGPRYSAEGS DFDKEEIECA IALSLSEQEH VIPQDDKGKK IIEYKSETEE DDDDDEDEDE EYMRAQLEAA
101: EEEERRVAQA QIEEEEKRRA EAQLEETEKL LAKARLEEEE MRRSKAQLEE DELLAKALQE SMNVGSPPRY DPGNILQPYP FLIPSSHRIC VGCQAEIGHG
201: RFLSCMGGVW HPECFCCNAC DKPIIDYEFS MSGNRPYHKL CYKEQHHPKC DVCHNFIPTN PAGLIEYRAH PFWMQKYCPS HERDGTPRCC SCERMEPKDT
301: KYLILDDGRK LCLECLDSAI MDTHECQPLY LEIREFYEGL HMKVEQQIPM LLVERSALNE AMEGEKHGHH HLPETRGLCL SEEQTVTTVL RRPRIGAGYK
401: LIDMITEPCR LIRRCEVTAI LILYGLPRLL TGSILAHEMM HAWLRLNGYP NLRPEVEEGI CQVLAHMWLE SETYAGSTLV DIASSSSSAV VSASSKKGER
501: SDFEKKLGEF FKHQIESDSS SAYGDGFRQG NQAVLKHGLR RTLDHIRLTG TFP
Arabidopsis Description
LIM domain-containing protein [Source:TAIR;Acc:AT4G36860]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.