CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18615	Canola	cytosol	68.08	91.74
CDX81383	Canola	cytosol	61.31	60.8
TraesCS2D01G016500.1	Wheat	cytosol	23.04	49.55
HORVU7Hr1G118120.1	Barley	cytosol	4.44	48.84
GSMUA_Achr9P07650_001	Banana	cytosol	32.35	47.52
CDY45247	Canola	cytosol	59.62	45.7
CDY54205	Canola	cytosol	59.62	44.13
CDX81382	Canola	cytosol	47.78	43.55
CDY18616	Canola	nucleus	45.45	42.83
CDX81381	Canola	cytosol	46.09	42.41
Os06t0182500-02	Rice	cytosol	41.65	40.53
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	37.84	40.13
GSMUA_Achr6P28210_001	Banana	cytosol	40.17	39.83
AT5G66620.1	Thale cress	cytosol	54.12	39.75
TraesCS2D01G016900.1	Wheat	cytosol	42.28	39.68
TraesCSU01G007800.1	Wheat	cytosol	42.28	39.68
TraesCS2B01G007700.1	Wheat	cytosol	42.07	39.48
KXG19479	Sorghum	cytosol	42.71	39.45
Zm00001d035844_P004	Maize	cytosol	42.28	39.37
CDY47008	Canola	cytosol, nucleus, peroxisome	37.84	39.08
GSMUA_Achr4P23130_001	Banana	mitochondrion	39.11	38.62
Os03t0626600-01	Rice	plasma membrane	39.32	37.88
Zm00001d033289_P001	Maize	cytosol	8.25	37.86
CDY54207	Canola	extracellular, plasma membrane	53.28	37.5
CDY41035	Canola	cytosol, mitochondrion	40.17	37.48
CDY26685	Canola	cytosol, mitochondrion	40.17	37.48
Os12t0596800-01	Rice	plasma membrane	38.48	37.45
EES16286	Sorghum	cytosol	39.75	37.01
TraesCS5A01G060800.1	Wheat	cytosol	38.05	36.89
TraesCS5D01G072300.1	Wheat	nucleus	37.84	36.68
CDX96669	Canola	cytosol	38.9	36.01
CDX83776	Canola	cytosol	38.27	35.42
Zm00001d033297_P003	Maize	cytosol, mitochondrion	37.63	35.39
TraesCS5B01G071300.1	Wheat	mitochondrion	38.27	35.08
OQU91328	Sorghum	cytosol, mitochondrion	37.42	35.05
Solyc01g105210.2.1	Tomato	extracellular	8.88	34.71
CDX75603	Canola	mitochondrion	42.71	34.12
CDX69251	Canola	mitochondrion, nucleus	42.92	34.0
CDY07633	Canola	plastid	36.36	33.53
CDY61785	Canola	plastid	36.58	33.53
AT5G66630.1	Thale cress	cytosol	48.63	32.76
CDY54206	Canola	cytosol	29.39	32.1
CDY20486	Canola	cytosol, plastid	35.52	31.94
CDX74829	Canola	cytosol, plastid	35.52	31.88
TraesCS4A01G245200.2	Wheat	cytosol	36.15	31.73
TraesCS4B01G070200.1	Wheat	cytosol	36.36	31.56
TraesCS4D01G069000.1	Wheat	cytosol	35.94	30.91
Solyc01g105200.2.1	Tomato	cytosol	10.57	30.86
Zm00001d030953_P001	Maize	plastid	34.88	29.41
PGSC0003DMT400032774	Potato	cytosol	17.12	28.42
PGSC0003DMT400032779	Potato	cytosol	12.47	27.96
Solyc01g105180.2.1	Tomato	cytosol	19.45	23.65
GSMUA_Achr9P07640_001	Banana	cytosol	6.98	21.15

Protein Annotations

EnsemblPlants:CDX81385	EnsemblPlantsGene:GSBRNA2T00134961001	Gene3D:2.10.110.10	GO:A0A078CX03	InterPro:DA1-like	InterPro:IPR001781
InterPro:IPR003903	InterPro:UIM_dom	InterPro:Znf_LIM	ncoils:Coil	PANTHER:PTHR24209	PANTHER:PTHR24209:SF13
PFAM:PF00412	PFAM:PF12315	PFscan:PS50023	PFscan:PS50330	ProteinID:CDX81385	ProteinID:CDX81385.1
ScanProsite:PS00478	SEG:seg	SMART:SM00132	UniParc:UPI0004EB55C4	MapMan:19.2.2.1.7	:

Description

BnaC09g07960D

Coordinates

chrLK031824:-:1447702..1450132

Molecular Weight (calculated)

53777.3 Da

IEP (calculated)

5.099

GRAVY (calculated)

-0.665

Length

473 amino acids

Sequence
(BLAST)

001: MGCFSCFKPS TSEDPFEAET DIVKQVSSND AHVQEDEQLA LAIQKSQEDE EERRRIRDLE EHAQERGERQ KYDNSSSLKG KMDGQTSEES VKEKEKRKQF
101: EEELKQDEQL AVSPPPPRSK CGGCHSEIEH GGSVDVFGVP WHPECFSCGA CRNPIVVHEV QNHVSNSRGK FHKNCYNRYC YVCQEKVKIR EYNSHPFWKE
201: IYCPAHETDG TPKCCSCERL EPRETDFVML DDGRWLCLEC MESAVMDTDE VQPLHFEIRD FFHGLFLPVE KEFSLLLVEK QALNKAEEEE KIDNQHGVVT
301: RGICLSEEQI VTNVSKGPKM GENKQLTGKT TESQRVVSGC PVTAILILYG LPRLLTGSIM AHEMMHAYLR LNGHNNLNKV LEEGICQVLG HMWLETQRYA
401: PIDVAAASSS SSSSNAAKKG VWSELEKKLV DFYKYEIETD ESAVYGEGFR KVNYMVTNSS LQETLKEILP RGG

Best Arabidopsis Sequence Match ( AT5G66620.1 )
(BLAST)

001: MASDYYSSDD EGFGEKVGLI GEKDRFEAET IHVIEVSQHE ADIQKAKQRS LATHEAEKLD LATHEAEQLD LAIQEFSRQE EEEERRRTRE LENDAQIANV
101: LQHEERERLI NKKTALEDEE DELLARTLEE SLKENNRRKM FEEQVNKDEQ LALIVQESLN MEEYPIRLEE YKSISRRAPL DVDEQFAKAV KESLKNKGKG
201: KQFEDEQVKK DEQLALIVQE SLNMVESPPR LEENNNISTR APVDEDEQLA KAVEESLKGK GQIKQSKDEV EGDGMLLELN PPPSLCGGCN FAVEHGGSVN
301: ILGVLWHPGC FCCRACHKPI AIHDIENHVS NSRGKFHKSC YERYCYVCKE KKMKTYNNHP FWEERYCPVH EADGTPKCCS CERLEPRESN YVMLADGRWL
401: CLECMNSAVM DSDECQPLHF DMRDFFEGLN MKIEKEFPFL LVEKQALNKA EKEEKIDYQY EVVTRGICLS EEQIVDSVSQ RPVRGPNNKL VGMATESQKV
501: TRECEVTAIL ILYGLPRLLT GYILAHEMMH AYLRLNGHRN LNNILEEGIC QVLGHLWLDS QTYATADATA DASSSASSSS RTPPAASASK KGEWSDFDKK
601: LVEFCKNQIE TDDSPVYGLG FRTVNEMVTN SSLQETLKEI LRQR

Arabidopsis Description

DAR6Protein DA1-related 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.