CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18615	Canola	cytosol	39.44	71.79
CDY45247	Canola	cytosol	64.95	67.26
CDX81383	Canola	cytosol	44.91	60.17
CDX81385	Canola	cytosol	44.13	59.62
TraesCS2D01G016500.1	Wheat	cytosol	17.37	50.45
GSMUA_Achr9P07650_001	Banana	cytosol	23.94	47.52
CDX81381	Canola	cytosol	36.15	44.94
AT5G66620.1	Thale cress	cytosol	45.23	44.88
HORVU7Hr1G118120.1	Barley	cytosol	2.97	44.19
CDY18616	Canola	nucleus	34.59	44.02
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	28.48	40.81
CDX81382	Canola	cytosol	33.02	40.66
CDY47008	Canola	cytosol, nucleus, peroxisome	29.11	40.61
Zm00001d033289_P001	Maize	cytosol	6.42	39.81
Os06t0182500-02	Rice	cytosol	29.73	39.09
Solyc01g105210.2.1	Tomato	extracellular	7.36	38.84
TraesCS5D01G072300.1	Wheat	nucleus	29.58	38.73
GSMUA_Achr6P28210_001	Banana	cytosol	28.8	38.57
CDY54207	Canola	extracellular, plasma membrane	40.53	38.54
TraesCS5A01G060800.1	Wheat	cytosol	29.42	38.52
Os12t0596800-01	Rice	plasma membrane	29.26	38.48
Zm00001d035844_P004	Maize	cytosol	30.2	37.99
TraesCSU01G007800.1	Wheat	cytosol	29.73	37.7
TraesCS2B01G007700.1	Wheat	cytosol	29.73	37.7
TraesCS2D01G016900.1	Wheat	cytosol	29.73	37.7
KXG19479	Sorghum	cytosol	30.05	37.5
GSMUA_Achr4P23130_001	Banana	mitochondrion	27.54	36.74
CDY41035	Canola	cytosol, mitochondrion	29.11	36.69
CDY26685	Canola	cytosol, mitochondrion	29.11	36.69
Os03t0626600-01	Rice	plasma membrane	28.17	36.66
TraesCS5B01G071300.1	Wheat	mitochondrion	29.58	36.63
EES16286	Sorghum	cytosol	29.11	36.61
OQU91328	Sorghum	cytosol, mitochondrion	28.48	36.04
Zm00001d033297_P003	Maize	cytosol, mitochondrion	28.33	35.98
CDX96669	Canola	cytosol	28.48	35.62
CDX83776	Canola	cytosol	28.17	35.23
AT5G66630.1	Thale cress	cytosol	38.5	35.04
CDY54206	Canola	cytosol	23.47	34.64
TraesCS4A01G245200.2	Wheat	cytosol	29.11	34.51
TraesCS4B01G070200.1	Wheat	cytosol	29.11	34.13
TraesCS4D01G069000.1	Wheat	cytosol	29.11	33.82
CDX75603	Canola	mitochondrion	31.3	33.78
CDX69251	Canola	mitochondrion, nucleus	31.46	33.67
PGSC0003DMT400032779	Potato	cytosol	11.11	33.65
CDY61785	Canola	plastid	26.92	33.33
CDY07633	Canola	plastid	26.45	32.94
Solyc01g105200.2.1	Tomato	cytosol	8.29	32.72
PGSC0003DMT400032774	Potato	cytosol	14.24	31.93
CDX74829	Canola	cytosol, plastid	26.29	31.88
CDY20486	Canola	cytosol, plastid	26.13	31.75
Zm00001d030953_P001	Maize	plastid	25.67	29.23
Solyc01g105180.2.1	Tomato	cytosol	15.65	25.71
GSMUA_Achr9P07640_001	Banana	cytosol	4.69	19.23

Protein Annotations

MapMan:19.2.2.1.7	Gene3D:2.10.110.10	GO:A0A078IST2	UniProt:A0A078IST2	EnsemblPlants:CDY54205	ProteinID:CDY54205
ProteinID:CDY54205.1	ncoils:Coil	InterPro:DA1-like	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00013599001	InterPro:IPR001781	PFAM:PF00412	PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023
PANTHER:PTHR24209	PANTHER:PTHR24209:SF13	SMART:SM00132	UniParc:UPI0004EE6E22	InterPro:Znf_LIM	SEG:seg

Description

BnaCnng26450DBnaCnng26450D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IST2]

Coordinates

chrLK033291:+:36650..40506

Molecular Weight (calculated)

72964.3 Da

IEP (calculated)

5.193

GRAVY (calculated)

-0.735

Length

639 amino acids

Sequence
(BLAST)

001: MWCLSCLKPS TSEDPFEAEI DLALAVSREE ADIQEAKQLA SALQESSRLQ KKHEDEQKKR TTELEKDAQI ARKIKQFEEQ VKNDEQVAQD LQNRFNKMAY
101: EESLGLHVLD DKDEHLAKTA KSSKEKRKSK QFEEQHVNKD EELALVLQES LNMVEPPPRP RIEEHKSIPR RAALDREEQL AKERSKEKGK GKQIEDEQVK
201: KDEQLAVIVQ ESLNMVEPPE EKSNISSSRA PMDEDEQRII WESLKGKGLI TQSEDEVEDV GKLVEANPPP PRRCGGCYYE IEHERSVDVL GVLWHPKCLI
301: CGACHNPIAI HEVETHVSNL RGKFHKNCYR RYCYVCQEKV KIRMFNEHPF WKERYCPDHD SDGTHKCFSC ERLEPRETNF VELDDGRRLC LECMDSAVMD
401: TYEVQPLHFE IREFFEGLNM KIEREFPFLL VEKQALNKAE EEEKIDNQDG VVTRGICLSE EQIVTSVSKG PKLGPNKQLI GKTTESQKVV SGCPVTAILI
501: LYGLPRLLTG YILAHEMMHA YLRLNGCRNL NTVMEEGICQ VLGHMWLETQ TYATIDAAAS SSSSAAAAES SSSSSRTPSE ANAGKKGEWS EFEKKLVEFC
601: KNQIETDESA AYGDGFRKVD HMVTNSSLKD TLKEILRRG

Best Arabidopsis Sequence Match ( AT5G66620.3 )
(BLAST)

001: MWCVPCCFKP STSEDRFEAE TIHVIEVSQH EADIQKAKQR SLATHEAEKL DLATHEAEQL DLAIQEFSRQ EEEEERRRTR ELENDAQIAN VLQHEERERL
101: INKKTALEDE EDELLARTLE ESLKENNRRK MFEEQVNKDE QLALIVQESL NMEEYPIRLE EYKSISRRAP LDVDEQFAKA VKESLKNKGK GKQFEDEQVK
201: KDEQLALIVQ ESLNMVESPP RLEENNNIST RAPVDEDEQL AKAVEESLKG KGQIKQSKDE VEGDGMLLEL NPPPSLCGGC NFAVEHGGSV NILGVLWHPG
301: CFCCRACHKP IAIHDIENHV SNSRGKFHKS CYERYCYVCK EKKMKTYNNH PFWEERYCPV HEADGTPKCC SCERLEPRES NYVMLADGRW LCLECMNSAV
401: MDSDECQPLH FDMRDFFEGL NMKIEKEFPF LLVEKQALNK AEKEEKIDYQ YEVVTRGICL SEEQIVDSVS QRPVRGPNNK LVGMATESQK VTRECEVTAI
501: LILYGLPRLL TGYILAHEMM HAYLRLNGHR NLNNILEEGI CQVLGHLWLD SQTYATADAT ADASSSASSS SRTPPAASAS KKGEWSDFDK KLVEFCKNQI
601: ETDDSPVYGL GFRTVNEMVT NSSLQETLKE ILRQR

Arabidopsis Description

DAR6Protein DA1-related 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.