CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18615	Canola	cytosol	39.87	70.09
CDY54205	Canola	cytosol	67.26	64.95
CDX81383	Canola	cytosol	47.0	60.8
CDX81385	Canola	cytosol	45.7	59.62
TraesCS2D01G016500.1	Wheat	cytosol	18.15	50.91
GSMUA_Achr9P07650_001	Banana	cytosol	24.8	47.52
CDY18616	Canola	nucleus	35.66	43.82
AT5G66620.1	Thale cress	cytosol	45.22	43.32
CDX81381	Canola	cytosol	35.98	43.19
CDX81382	Canola	cytosol	35.33	42.0
HORVU7Hr1G118120.1	Barley	cytosol	2.92	41.86
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	29.17	40.36
Zm00001d033289_P001	Maize	cytosol	6.65	39.81
CDY47008	Canola	cytosol, nucleus, peroxisome	29.34	39.52
Os06t0182500-02	Rice	cytosol	30.79	39.09
Solyc01g105210.2.1	Tomato	extracellular	7.62	38.84
GSMUA_Achr6P28210_001	Banana	cytosol	29.98	38.78
TraesCS5A01G060800.1	Wheat	cytosol	30.47	38.52
Os12t0596800-01	Rice	plasma membrane	30.31	38.48
TraesCS5D01G072300.1	Wheat	nucleus	30.31	38.32
Zm00001d035844_P004	Maize	cytosol	30.96	37.6
TraesCS2D01G016900.1	Wheat	cytosol	30.63	37.5
TraesCS2B01G007700.1	Wheat	cytosol	30.63	37.5
TraesCSU01G007800.1	Wheat	cytosol	30.63	37.5
Os03t0626600-01	Rice	plasma membrane	29.82	37.47
CDY54207	Canola	extracellular, plasma membrane	40.52	37.2
GSMUA_Achr4P23130_001	Banana	mitochondrion	28.85	37.16
KXG19479	Sorghum	cytosol	30.79	37.11
CDY41035	Canola	cytosol, mitochondrion	30.15	36.69
OQU91328	Sorghum	cytosol, mitochondrion	29.98	36.63
TraesCS5B01G071300.1	Wheat	mitochondrion	30.63	36.63
CDY26685	Canola	cytosol, mitochondrion	29.98	36.49
EES16286	Sorghum	cytosol	29.98	36.42
Zm00001d033297_P003	Maize	cytosol, mitochondrion	29.66	36.38
CDX96669	Canola	cytosol	29.17	35.23
CDX83776	Canola	cytosol	29.01	35.03
CDX69251	Canola	mitochondrion, nucleus	33.71	34.84
CDX75603	Canola	mitochondrion	33.39	34.8
TraesCS4A01G245200.2	Wheat	cytosol	30.15	34.51
AT5G66630.1	Thale cress	cytosol	39.06	34.33
TraesCS4B01G070200.1	Wheat	cytosol	29.82	33.76
CDY54206	Canola	cytosol	23.66	33.72
PGSC0003DMT400032779	Potato	cytosol	11.51	33.65
TraesCS4D01G069000.1	Wheat	cytosol	29.98	33.64
Solyc01g105200.2.1	Tomato	cytosol	8.59	32.72
CDY07633	Canola	plastid	27.07	32.55
CDY61785	Canola	plastid	26.9	32.17
PGSC0003DMT400032774	Potato	cytosol	14.75	31.93
CDY20486	Canola	cytosol, plastid	26.9	31.56
CDX74829	Canola	cytosol, plastid	26.9	31.5
Zm00001d030953_P001	Maize	plastid	26.26	28.88
Solyc01g105180.2.1	Tomato	cytosol	16.21	25.71
GSMUA_Achr9P07640_001	Banana	cytosol	5.02	19.87

Protein Annotations

MapMan:19.2.2.1.7	Gene3D:2.10.110.10	GO:A0A078I594	UniProt:A0A078I594	EnsemblPlants:CDY45247	ProteinID:CDY45247
ProteinID:CDY45247.1	ncoils:Coil	InterPro:DA1-like	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00081687001	InterPro:IPR001781	PFAM:PF00412	PFAM:PF12315	ScanProsite:PS00478	PFscan:PS50023
PANTHER:PTHR24209	PANTHER:PTHR24209:SF13	SMART:SM00132	UniParc:UPI0004EE0E06	InterPro:Znf_LIM	SEG:seg

Description

BnaA07g12430DBnaA07g12430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I594]

Coordinates

chrLK032618:+:199495..202730

Molecular Weight (calculated)

69778.2 Da

IEP (calculated)

4.536

GRAVY (calculated)

-0.642

Length

617 amino acids

Sequence
(BLAST)

001: MWCLSCLKPS TSEDPFEAEI DLALDVSREE ADIQEAKQLA FALQESSLLQ KQQEEKRRAG ELEKDAQIAR AFQYDETERE LDNDSALEDE KDEQPAKIAV
101: ESFQDKGKLK QFEEQVKNDE QLALILQESL NMVEPPPPPP NEEHKSISRR AAFDVQEQLA KEKGKGKQIE DEQVKKDEQL AVIVQESLNM VESPEEDSNI
201: SSSRAPMDED EQRIIWESLK GKGLLTQPED EVEDVGQLLE ANPAPPPSRC GGCYCEIEQE RSVDVLGVLW HPECLICGAC HNPITIHEVE THVSNLRGKF
301: HKNCYRRYCY VCQEKVKIRM FNKHPFWKEN YCPDHDSDGT HKCFSCERLE PKGTDFVELD DGRRLCLQCM DSAVMDTYEV QPLHFEIREF FEGLNMKIER
401: EFPFLLVEKQ ALNKAEEEEK IDNQEDGVVT RGICLSEEQI VTSVSKGPKM GPNKQLIGKT TESQKVVSGC PVTAILILYG LPRLLTGYIL AHEMMHAYLR
501: LNGCRNLNNV MEEGICQVLG HMWLETQTYA TIDAAASSAA PAPAAAESSS SSSRTPSEAS AGKKGEWSEF EKKLVEFCKN QIETDESAAY GDGFRKVNHM
601: VTNSSLKDTL KEILRRG

Best Arabidopsis Sequence Match ( AT5G66620.3 )
(BLAST)

001: MWCVPCCFKP STSEDRFEAE TIHVIEVSQH EADIQKAKQR SLATHEAEKL DLATHEAEQL DLAIQEFSRQ EEEEERRRTR ELENDAQIAN VLQHEERERL
101: INKKTALEDE EDELLARTLE ESLKENNRRK MFEEQVNKDE QLALIVQESL NMEEYPIRLE EYKSISRRAP LDVDEQFAKA VKESLKNKGK GKQFEDEQVK
201: KDEQLALIVQ ESLNMVESPP RLEENNNIST RAPVDEDEQL AKAVEESLKG KGQIKQSKDE VEGDGMLLEL NPPPSLCGGC NFAVEHGGSV NILGVLWHPG
301: CFCCRACHKP IAIHDIENHV SNSRGKFHKS CYERYCYVCK EKKMKTYNNH PFWEERYCPV HEADGTPKCC SCERLEPRES NYVMLADGRW LCLECMNSAV
401: MDSDECQPLH FDMRDFFEGL NMKIEKEFPF LLVEKQALNK AEKEEKIDYQ YEVVTRGICL SEEQIVDSVS QRPVRGPNNK LVGMATESQK VTRECEVTAI
501: LILYGLPRLL TGYILAHEMM HAYLRLNGHR NLNNILEEGI CQVLGHLWLD SQTYATADAT ADASSSASSS SRTPPAASAS KKGEWSDFDK KLVEFCKNQI
601: ETDDSPVYGL GFRTVNEMVT NSSLQETLKE ILRQR

Arabidopsis Description

DAR6Protein DA1-related 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.