CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18615	Canola	cytosol	54.72	74.36
CDX81385	Canola	cytosol	60.8	61.31
TraesCS2D01G016500.1	Wheat	cytosol	23.06	50.0
GSMUA_Achr9P07650_001	Banana	cytosol	32.49	48.14
CDY45247	Canola	cytosol	60.8	47.0
CDY54205	Canola	cytosol	60.17	44.91
CDY18616	Canola	nucleus	47.17	44.82
AT5G66620.1	Thale cress	cytosol	59.96	44.41
HORVU7Hr1G118120.1	Barley	cytosol	3.98	44.19
CDX81381	Canola	cytosol	46.12	42.8
Zm00001d033289_P001	Maize	cytosol	9.22	42.72
CDY47008	Canola	cytosol, nucleus, peroxisome	40.67	42.36
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	37.74	40.36
CDX81382	Canola	cytosol	43.61	40.08
Os06t0182500-02	Rice	cytosol	40.04	39.3
GSMUA_Achr6P28210_001	Banana	cytosol	38.99	38.99
CDY54207	Canola	extracellular, plasma membrane	54.09	38.39
TraesCS5D01G072300.1	Wheat	nucleus	38.99	38.11
Solyc01g105210.2.1	Tomato	extracellular	9.64	38.02
TraesCS5A01G060800.1	Wheat	cytosol	38.78	37.91
TraesCSU01G007800.1	Wheat	cytosol	40.04	37.9
TraesCS2D01G016900.1	Wheat	cytosol	40.04	37.9
TraesCS2B01G007700.1	Wheat	cytosol	39.83	37.7
Os12t0596800-01	Rice	plasma membrane	38.36	37.65
Zm00001d035844_P004	Maize	cytosol	39.83	37.4
KXG19479	Sorghum	cytosol	40.04	37.3
Os03t0626600-01	Rice	plasma membrane	38.36	37.27
AT5G66630.1	Thale cress	cytosol	54.51	37.04
GSMUA_Achr4P23130_001	Banana	mitochondrion	36.9	36.74
OQU91328	Sorghum	cytosol, mitochondrion	38.57	36.44
Zm00001d033297_P003	Maize	cytosol, mitochondrion	38.16	36.18
CDY26685	Canola	cytosol, mitochondrion	38.36	36.09
CDY41035	Canola	cytosol, mitochondrion	38.36	36.09
TraesCS5B01G071300.1	Wheat	mitochondrion	38.99	36.05
EES16286	Sorghum	cytosol	38.16	35.83
CDY54206	Canola	cytosol	32.49	35.8
CDX83776	Canola	cytosol	37.11	34.64
CDX96669	Canola	cytosol	37.11	34.64
CDX69251	Canola	mitochondrion, nucleus	42.14	33.67
CDX75603	Canola	mitochondrion	41.72	33.61
TraesCS4A01G245200.2	Wheat	cytosol	37.32	33.02
TraesCS4B01G070200.1	Wheat	cytosol	37.32	32.66
TraesCS4D01G069000.1	Wheat	cytosol	37.32	32.36
CDY07633	Canola	plastid	34.8	32.36
CDY61785	Canola	plastid	34.17	31.59
Solyc01g105200.2.1	Tomato	cytosol	10.48	30.86
PGSC0003DMT400032779	Potato	cytosol	13.63	30.81
CDX74829	Canola	cytosol, plastid	33.96	30.74
CDY20486	Canola	cytosol, plastid	33.75	30.61
PGSC0003DMT400032774	Potato	cytosol	17.82	29.82
Zm00001d030953_P001	Maize	plastid	33.12	28.16
Solyc01g105180.2.1	Tomato	cytosol	20.13	24.68
GSMUA_Achr9P07640_001	Banana	cytosol	5.45	16.67

Protein Annotations

EnsemblPlants:CDX81383	EnsemblPlantsGene:GSBRNA2T00134959001	Gene3D:2.10.110.10	GO:A0A078D225	InterPro:DA1-like	InterPro:IPR001781
InterPro:Znf_LIM	ncoils:Coil	PANTHER:PTHR24209	PANTHER:PTHR24209:SF13	PFAM:PF00412	PFAM:PF12315
PFscan:PS50023	ProteinID:CDX81383	ProteinID:CDX81383.1	ScanProsite:PS00478	SEG:seg	SMART:SM00132
UniParc:UPI0004EAFC58	MapMan:19.2.2.1.7	:	:	:	:

Description

BnaC09g07940D

Coordinates

chrLK031824:-:1425144..1427452

Molecular Weight (calculated)

54347.2 Da

IEP (calculated)

4.801

GRAVY (calculated)

-0.550

Length

477 amino acids

Sequence
(BLAST)

001: MGCFSCFKPS PSEDPFEVET VIVEEVSWYE AHIQESERLA LKIQEAEQLD VAIQESKRSA LDIQEAEQLE VIPPPPPPPP PLKEHNNISS RAPLDEDDEE
101: RIIRDSSKET KPSEDEVIPP RSMCGGCHFE IEQGGSVDVL GVPWHPECFS CGACHNPISI ENHVSNSRGK FHRACYERYC YVCKEKKMKN YHKHPFWEER
201: YCPAHETDGT HKCFSCERLE PRGTNFVMLD DGRWLCLECM SSAVMDTDEV QPLHFEIREF FHDLNMKVEK EFPLLLVEKQ ALNKAEEEEK IDNQHGVVTR
301: GICLSEEQIV TNVSKGPKMG PNKQLIGLTT ESQRVVSEFE VTAILILYGL PRLLTGYILA HEMMHAYLRL NGYRNLNNVL EEGICQVLGH MWLESQTYAT
401: IDAAAASYSS SSQPPGGANA SKKGEWSEFE KKLVEFCKNE IETDESAVYG EGFRKVNHMV TNSNLYETLQ EILRRRG

Best Arabidopsis Sequence Match ( AT5G66620.1 )
(BLAST)

001: MASDYYSSDD EGFGEKVGLI GEKDRFEAET IHVIEVSQHE ADIQKAKQRS LATHEAEKLD LATHEAEQLD LAIQEFSRQE EEEERRRTRE LENDAQIANV
101: LQHEERERLI NKKTALEDEE DELLARTLEE SLKENNRRKM FEEQVNKDEQ LALIVQESLN MEEYPIRLEE YKSISRRAPL DVDEQFAKAV KESLKNKGKG
201: KQFEDEQVKK DEQLALIVQE SLNMVESPPR LEENNNISTR APVDEDEQLA KAVEESLKGK GQIKQSKDEV EGDGMLLELN PPPSLCGGCN FAVEHGGSVN
301: ILGVLWHPGC FCCRACHKPI AIHDIENHVS NSRGKFHKSC YERYCYVCKE KKMKTYNNHP FWEERYCPVH EADGTPKCCS CERLEPRESN YVMLADGRWL
401: CLECMNSAVM DSDECQPLHF DMRDFFEGLN MKIEKEFPFL LVEKQALNKA EKEEKIDYQY EVVTRGICLS EEQIVDSVSQ RPVRGPNNKL VGMATESQKV
501: TRECEVTAIL ILYGLPRLLT GYILAHEMMH AYLRLNGHRN LNNILEEGIC QVLGHLWLDS QTYATADATA DASSSASSSS RTPPAASASK KGEWSDFDKK
601: LVEFCKNQIE TDDSPVYGLG FRTVNEMVTN SSLQETLKEI LRQR

Arabidopsis Description

DAR6Protein DA1-related 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.