CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	peroxisome
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037159.1-P	Field mustard	cytosol	79.38	79.07
CDY18616	Canola	nucleus	75.1	76.89
AT5G66640.5	Thale cress	nucleus	53.7	57.26
CDY18615	Canola	cytosol	38.52	56.41
CDX81382	Canola	cytosol	56.03	55.49
GSMUA_Achr9P07650_001	Banana	cytosol	30.16	48.14
CDX81383	Canola	cytosol	42.8	46.12
CDX81385	Canola	cytosol	42.41	46.09
TraesCS2D01G016500.1	Wheat	cytosol	19.46	45.45
CDY47008	Canola	cytosol, nucleus, peroxisome	38.52	43.23
GSMUA_Achr6P28210_001	Banana	cytosol	35.99	38.78
GSMUA_Achr7P00700_001	Banana	endoplasmic reticulum	33.27	38.34
Os06t0182500-02	Rice	cytosol	35.99	38.07
Zm00001d033289_P001	Maize	cytosol	7.59	37.86
HORVU7Hr1G118120.1	Barley	cytosol	3.11	37.21
Os12t0596800-01	Rice	plasma membrane	34.82	36.83
GSMUA_Achr4P23130_001	Banana	mitochondrion	34.24	36.74
TraesCSU01G007800.1	Wheat	cytosol	35.99	36.71
TraesCS2B01G007700.1	Wheat	cytosol	35.99	36.71
TraesCS2D01G016900.1	Wheat	cytosol	35.99	36.71
CDY41035	Canola	cytosol, mitochondrion	35.99	36.49
CDY26685	Canola	cytosol, mitochondrion	35.8	36.29
CDY54205	Canola	cytosol	44.94	36.15
TraesCS5D01G072300.1	Wheat	nucleus	34.24	36.07
Os03t0626600-01	Rice	plasma membrane	34.44	36.05
CDX83776	Canola	cytosol	35.8	36.01
CDY45247	Canola	cytosol	43.19	35.98
TraesCS5A01G060800.1	Wheat	cytosol	34.05	35.86
CDX96669	Canola	cytosol	35.41	35.62
KXG19479	Sorghum	cytosol	35.41	35.55
Zm00001d035844_P004	Maize	cytosol	35.02	35.43
EES16286	Sorghum	cytosol	35.02	35.43
OQU91328	Sorghum	cytosol, mitochondrion	33.85	34.46
TraesCS5B01G071300.1	Wheat	mitochondrion	34.24	34.11
Zm00001d033297_P003	Maize	cytosol, mitochondrion	33.07	33.8
Solyc01g105210.2.1	Tomato	extracellular	7.78	33.06
TraesCS4A01G245200.2	Wheat	cytosol	34.63	33.02
CDX75603	Canola	mitochondrion	37.35	32.43
CDX69251	Canola	mitochondrion, nucleus	37.35	32.16
TraesCS4D01G069000.1	Wheat	cytosol	34.24	32.0
CDY07633	Canola	plastid	31.71	31.77
TraesCS4B01G070200.1	Wheat	cytosol	33.66	31.74
CDY61785	Canola	plastid	31.71	31.59
CDY54206	Canola	cytosol	26.46	31.41
CDY54207	Canola	extracellular, plasma membrane	40.66	31.1
CDX74829	Canola	cytosol, plastid	31.32	30.55
CDY20486	Canola	cytosol, plastid	31.13	30.42
Solyc01g105200.2.1	Tomato	cytosol	9.14	29.01
PGSC0003DMT400032779	Potato	cytosol	11.67	28.44
PGSC0003DMT400032774	Potato	cytosol	15.18	27.37
Zm00001d030953_P001	Maize	plastid	29.77	27.27
Solyc01g105180.2.1	Tomato	cytosol	17.12	22.62
GSMUA_Achr9P07640_001	Banana	cytosol	5.84	19.23

Protein Annotations

EnsemblPlants:CDX81381	EnsemblPlantsGene:GSBRNA2T00134957001	Gene3D:2.10.110.10	GO:A0A078CW77	InterPro:DA1-like	InterPro:IPR001781
InterPro:Znf_LIM	ncoils:Coil	PANTHER:PTHR24209	PANTHER:PTHR24209:SF13	PFAM:PF00412	PFAM:PF12315
PFscan:PS50023	ProteinID:CDX81381	ProteinID:CDX81381.1	ScanProsite:PS00478	SEG:seg	SMART:SM00132
SUPFAM:SSF57716	UniParc:UPI0004EDB5F4	MapMan:19.2.2.1.7	:	:	:

Description

BnaC09g07920D

Coordinates

chrLK031824:-:1396365..1398980

Molecular Weight (calculated)

59228.5 Da

IEP (calculated)

6.427

GRAVY (calculated)

-0.717

Length

514 amino acids

Sequence
(BLAST)

001: MGWFPCFSPS TTQDDPSEDH YKTVIKISRH EKEDGIVRQK REKAEQVQTE RAKEMSLKQF EKEEAKRRLQ ESKEEGKRKQ VDDDDDQVDT EQIEMNEVME
101: ESLKLFQKEE EKRRLEKSNE EGKRKQVEEG QFKHSKDKEV ALPSICNGCK SEIKDGLSVK AFGDLWHPHC LCCLHCHKPI ALDKIAKRGK FHKSCYKEHR
201: HPTCCVCQKK IPSTEEGIKY NEHPFWKEKY CPCHDRDGTA KCCSCERLEP RGTNFVMLGD DRWLCLQCIG SSVMDTYECI DLHVEIREFF DGLFLPVDKE
301: FPLLLVEKQA LNKAEKEEKI DYQHAVVTRG ICLSEEQNVT SVKERPKRGP NNTLINMVTE TQMVSGCEVT AILIIYGLPR LLTGYILVHE MMHAYLRLNG
401: YKNLKLELEE GLCQVLGLRW LESHTFPSDD ATAASSSSNT PPAAASTLKK GDDWSDFEKK LVEFCIHQIK EDDSPVYGLG FKQVHEIWVS NHYSLKDTLK
501: DIVNASKNAP VSKF

Best Arabidopsis Sequence Match ( AT5G66640.4 )
(BLAST)

001: MSCCFSCFKH DPSKDPLNTA LVISRYEEED RMVRRKRQEE DEKIEIERVK EESLKLAKQA EEKRRLEESK EQGKRIQVDD DQLAKTTSKD KGQINHSKDV
101: VEEDVNPPPS IDGKSEIGDG TSVNPRCLCC FHCHRPFVMH EILKKGKFHI DCYKEYYRNR NCYVCQQKIP VNAEGIRKFS EHPFWKEKYC PIHDEDGTAK
201: CCSCERLEPR GTNYVMLGDF RWLCIECMGS AVMDTNEVQP LHFEIREFFE GLFLKVDKEF ALLLVEKQAL NKAEEEEKID YHRAAVTRGL CMSEEQIVPS
301: IIKGPRMGPD NQLITDIVTE SQRVSGFEVT GILIIYGLPR LLTGYILAHE MMHAWLRLNG YKNLKLELEE GLCQALGLRW LESQTFASTD AAAAAAVASS
401: SSFSSSTAPP AAITSKKSDD WSIFEKKLVE FCMNQIKEDD SPVYGLGFKQ VYEMMVSNNY NIKDTLKDIV SASNATPDST V

Arabidopsis Description

DAR3DA1-related protein 3 [Source:TAIR;Acc:AT5G66640]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.