Factsheet for Zm00001d028567_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G060560.7	Barley	cytosol	77.63	78.39
TraesCS4D01G211600.2	Wheat	endoplasmic reticulum	77.82	78.28
TraesCS4A01G093500.1	Wheat	endoplasmic reticulum	77.63	78.08
Os03t0267800-01	Rice	cytosol	76.07	78.04
Zm00001d047837_P003	Maize	cytosol	73.35	73.49
TraesCS4B01G210900.3	Wheat	cytosol	76.85	73.15
GSMUA_Achr5P07030_001	Banana	cytosol	60.89	66.74
GSMUA_Achr10P...	Banana	mitochondrion	61.28	66.74
GSMUA_Achr8P19520_001	Banana	cytosol	59.14	64.0
PGSC0003DMT400069927	Potato	cytosol	54.09	62.05
VIT_13s0019g02430.t01	Wine grape	plastid	56.81	57.82
KRG97826	Soybean	cytosol	49.42	57.73
Solyc05g052910.2.1	Tomato	plastid	55.84	56.94
KRH15044	Soybean	cytosol	54.28	55.36
CDY07633	Canola	plastid	53.89	54.0
Bra000152.1-P	Field mustard	plastid	53.7	53.7
CDY61785	Canola	plastid	53.5	53.29
KRH31044	Soybean	nucleus	51.95	52.46
CDX74829	Canola	cytosol, plastid	53.11	51.8
AT2G39830.2	Thale cress	cytosol, plastid	53.5	51.79
Solyc03g079910.2.1	Tomato	cytosol	54.86	51.37
CDY20486	Canola	cytosol, plastid	52.53	51.33
KRH73095	Soybean	plastid	55.64	50.98
Bra005011.1-P	Field mustard	cytosol, plastid	49.61	50.9
Zm00001d035844_P004	Maize	cytosol	50.19	50.79
PGSC0003DMT400055872	Potato	cytosol	51.95	50.66
Zm00001d033289_P001	Maize	cytosol	9.92	49.51
Zm00001d033297_P003	Maize	cytosol, mitochondrion	45.91	46.92
Zm00001d030953_P001	Maize	plastid	42.02	38.5

Protein Annotations

EntrezGene:100279838	MapMan:19.2.2.1.7	Gene3D:2.10.110.10	UniProt:A0A1D6JXK9	InterPro:DA1-like	GO:GO:0003674
GO:GO:0005488	GO:GO:0046872	InterPro:IPR001781	ProteinID:ONL96412.1	PFAM:PF00412	PFAM:PF12315
ScanProsite:PS00478	PFscan:PS50023	PANTHER:PTHR24209	PANTHER:PTHR24209:SF21	SMART:SM00132	SUPFAM:SSF57716
UniParc:UPI000221C9FD	EnsemblPlantsGene:Zm00001d028567	EnsemblPlants:Zm00001d028567_P001	EnsemblPlants:Zm00001d028567_T001	InterPro:Znf_LIM	SEG:seg

Description

LIM-transcription factor 2Protein DA1-related 2

Coordinates

chr1:-:39386655..39389622

Molecular Weight (calculated)

58106.6 Da

IEP (calculated)

8.546

GRAVY (calculated)

-0.641

Length

514 amino acids

Sequence
(BLAST)

001: MSPRTERRSG LMKWLCRFLK GPKPGEPSRR RPQVAAGEGE GALWHQRPAR PKIDPPRNEN EELVDRAIAE PLAEAVKPPR EKTHRGEDSN DDEDLTRAVQ
101: DSLNMNPYTP YNPYPPSQAQ PIGHRVCGGC KHEIGRGHYL SCMGIYWHPQ CFRCRSCGHL IRETEFTLLG TDSYHKLCYK ELHHPKCDVC LQFVRPRVLG
201: KPERSALQTV INCIPTNGSG LIEYRAHPFW GQKYCPSHER DRTPRCCSCE KMEVQPRNTK YMSLGDGRGL CMECLGSAVM DTSECQPLYH SIRDYYEGMD
301: MRLDQQIPVL LVERQALNEA MEGESKGPHH MPETRGLCLS EERTVSSILR RPRIGGNRLL GMRTRPQKLT RRCEVTAILV LYGLPRLLTG SILAHELMHG
401: WLRLKGYRNL NAEVEEGICQ VMSYLWLESE ILPSSSRHAQ PSSSSSSSSY PATSSEKGGI SHTGKKLGEF FMHQIANDTS TAYGDGFRTA YAAVNKYGLR
501: QTLSHIRLTG GFPV

Best Arabidopsis Sequence Match ( AT2G39830.3 )
(BLAST)

001: MDSSSSSSSS SPSSSYGVAR VSHISNPCIF GEVGSSSSST YRDKKWKLMK WVSKLFKSGS NGGGSGAHTN HHPPQFQEDE NMDDRSRGAR DKEELDRSIS
101: LSLADNTKRP HGYGWSMDNN RDFPRPFHGG LNPSSFIPPY EPSYQYRRRQ RICGGCNSDI GSGNYLGCMG TFFHPECFRC HSCGYAITEH EFSLSGTKPY
201: HKLCFKELTH PKCEVCHHFI PTNDAGLIEY RCHPFWNQKY CPSHEYDKTA RCCSCERLES WDVRYYTLED GRSLCLECME TAITDTGECQ PLYHAIRDYY
301: EGMYMKLDQQ IPMLLVQREA LNDAIVGEKN GYHHMPETRG LCLSEEQTVT SVLRRPRLGA HRLVGMRTQP QRLTRKCEVT AILVLYGLPR LLTGAILAHE
401: LMHGWLRLNG FRNLNPEVEE GICQVLSYMW LESEVLSDPS TRNLPSTSSV ATSSSSSFSN KKGGKSNVEK KLGEFFKHQI AHDASPAYGG GFRAANAAAC
501: KYGLRRTLDH IRLTGTFPL

Arabidopsis Description

DAR2DA1-related protein 2 [Source:TAIR;Acc:AT2G39830]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.