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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 9
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:mitochondrion
ChloroP:plastid
EpiLoc:mitochondrion
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g024160.2.1 Tomato mitochondrion 96.24 96.5
PGSC0003DMT400011072 Potato mitochondrion 76.08 76.69
PGSC0003DMT400069263 Potato mitochondrion 75.81 73.44
PGSC0003DMT400019358 Potato plastid 37.9 33.81
PGSC0003DMT400080554 Potato plastid 36.83 31.42
Protein Annotations
KEGG:00010+1.2.4.1KEGG:00020+1.2.4.1KEGG:00620+1.2.4.1EntrezGene:102602122MapMan:2.2.1.1.2Gene3D:3.40.50.920
Gene3D:3.40.50.970GO:GO:0003674GO:GO:0003824GO:GO:0004739GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005759GO:GO:0005975GO:GO:0006086
GO:GO:0006091GO:GO:0006096GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009058GO:GO:0009987GO:GO:0016491GO:GO:0055114InterPro:IPR009014UniProt:M1CDU5
InterPro:PDHBPFAM:PF02779PFAM:PF02780EnsemblPlantsGene:PGSC0003DMG400025407PGSC:PGSC0003DMG400025407EnsemblPlants:PGSC0003DMT400065364
PANTHER:PTHR11624PANTHER:PTHR11624:SF94SMART:SM00861SUPFAM:SSF52518SUPFAM:SSF52922InterPro:THDP-binding
InterPro:Transketo_C/PFOR_IIInterPro:Transketolase-like_Pyr-bdInterPro:Transketolase_CUniParc:UPI00029661D9RefSeq:XP_006363263.1:
Description
Pyruvate dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400025407]
Coordinates
chr5:+:16698981..16707877
Molecular Weight (calculated)
40500.0 Da
IEP (calculated)
6.528
GRAVY (calculated)
0.002
Length
372 amino acids
Sequence
(BLAST)
001: MMLRIAKPKV SLRILTHPIF GAPTLTRRSY SSGVKVKQMM VREALNSALD EEMTADPRVF LMGEEVGEYQ GAYKVSKGLL HKYGPDRVVD TPITEAGFTG
101: LATGAAYYGL RPVLEFMTFN FAMQAIDHLV NSAAKTHYMS GGNISVPIVF RGPNGAALGV GAQHSQCYAP WYGSVPGLKV VAPYSSEDAR GLLKAAIRDP
201: DPVVFLENEL LYGESFPVSE EVLDPSFTLP IGKAKIEKEG RDVTITAFSR MVGYALKAAE TLAKEDINAE IINIRSIRPL DKSSINASVR KTNRLVTVEE
301: GFPQHGVGAE ICASVVEEIF EYLDAPVERI TGADVPMPYA ANLERMALPQ VEDIVRAAKR VCYRSIPIAA AV
Best Arabidopsis Sequence Match ( AT5G50850.1 )
(BLAST)
001: MLGILRQRAI DGASTLRRTR FALVSARSYA AGAKEMTVRD ALNSAIDEEM SADPKVFVMG EEVGQYQGAY KITKGLLEKY GPERVYDTPI TEAGFTGIGV
101: GAAYAGLKPV VEFMTFNFSM QAIDHIINSA AKSNYMSAGQ INVPIVFRGP NGAAAGVGAQ HSQCYAAWYA SVPGLKVLAP YSAEDARGLL KAAIRDPDPV
201: VFLENELLYG ESFPISEEAL DSSFCLPIGK AKIEREGKDV TIVTFSKMVG FALKAAEKLA EEGISAEVIN LRSIRPLDRA TINASVRKTS RLVTVEEGFP
301: QHGVCAEICA SVVEESFSYL DAPVERIAGA DVPMPYAANL ERLALPQIED IVRASKRACY RSK
Arabidopsis Description
PDH2Pyruvate dehydrogenase E1 component subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A178UM82]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.