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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 2
  • plastid 7
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g006930.2.1 Tomato cytosol 20.53 16.53
Solyc01g010470.2.1 Tomato plastid 5.53 11.35
Solyc09g008260.2.1 Tomato plastid 11.32 9.37
Solyc02g091530.2.1 Tomato nucleus 8.42 8.72
Protein Annotations
EnsemblPlants:Solyc01g010460.2.1EnsemblPlantsGene:Solyc01g010460.2PANTHER:PTHR10343PANTHER:PTHR10343:SF47SEG:segUniParc:UPI0002761AFD
UniProt:K4ATP1MapMan:35.1::::
Description
No Description!
Coordinates
chr1:+:5356756..5359109
Molecular Weight (calculated)
42320.5 Da
IEP (calculated)
5.160
GRAVY (calculated)
-0.582
Length
380 amino acids
Sequence
(BLAST)
001: MVSLILTPTH LSFSPIPTPI VINSPKRLHC RRKAAIFNLV LGKNMGSFQV FKKLSKKRVG DSSYCLCRKG LGSEGDMELE EEILAFMEIS ENPNVFPTRK
101: ELEKAGRVDL VEAIKKRGGW FSFGWDSEDD DTNTVNVNVN EVESVEMNFD IEEFHERVKR CQESDLLHEN EAHFSGSGDS SSSQPASSSG RSIETVAEEN
201: SGIEGILSRL EKERNSSLGI DLGKPGHTSH TSSRDNIDDR SFGTSDADRT DLRKNESLSK GSSMKDIQSD EEIYRSVSPA RLRKWSIQRA GLQDIDFEAA
301: EVALGKSWIG STSEASGDDV VNITASRFEA LQRSKNGNNN EMSTRLKHLE LELSMTLRSL KSKSEEFSSK EVLICVFCFS
Best Arabidopsis Sequence Match ( AT1G27070.1 )
(BLAST)
001: MVSINSGPIS SFVSRYSMID SDTLLHLSSF GSTFNPNYKA KACIRFARKV CGSTVLGFLE VKPRKKSCCS RCNGVSRMCN KRNLGWDSEG SKDLETEILE
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS
Arabidopsis Description
PTST2Protein PTST homolog 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFY0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.