Factsheet for Solyc01g010470.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15220_001	Banana	endoplasmic reticulum	49.19	43.13
PGSC0003DMT400068857	Potato	cytosol	72.43	28.33
Solyc05g006930.2.1	Tomato	cytosol	57.3	22.46
GSMUA_Achr7P12210_001	Banana	cytosol	46.49	21.39
CDY16216	Canola	plastid	51.35	18.74
VIT_01s0026g01510.t01	Wine grape	plastid	54.05	18.48
KRH69376	Soybean	plastid	51.35	18.41
CDY14708	Canola	plastid	49.73	18.11
TraesCS4A01G284000.1	Wheat	mitochondrion, nucleus	44.86	18.04
GSMUA_Achr9P10940_001	Banana	cytosol	47.03	18.01
KRH74757	Soybean	plastid	50.27	17.99
AT1G27070.1	Thale cress	plastid	50.27	17.48
TraesCS4B01G029700.2	Wheat	mitochondrion	45.41	17.43
Os03t0686900-01	Rice	plastid	46.49	16.26
Zm00001d033529_P001	Maize	plastid	44.32	15.16
TraesCS4D01G026700.2	Wheat	plastid	44.86	14.85
OQU91183	Sorghum	plastid	44.32	14.07
Zm00001d013530_P001	Maize	plastid	42.16	13.4
HORVU4Hr1G004470.4	Barley	mitochondrion	46.49	13.4
Bra024663.1-P	Field mustard	mitochondrion, nucleus	51.35	10.51
Solyc02g091530.2.1	Tomato	nucleus	18.92	9.54
Solyc09g008260.2.1	Tomato	plastid	20.54	8.28
Solyc01g010460.2.1	Tomato	plastid	11.35	5.53

Protein Annotations

EnsemblPlants:Solyc01g010470.2.1	EnsemblPlantsGene:Solyc01g010470.2	Gene3D:2.60.40.10	InterPro:AMPK1_CBM	InterPro:IPR013783	InterPro:Ig-like_fold
InterPro:Ig_E-set	PANTHER:PTHR10343	PANTHER:PTHR10343:SF47	PFAM:PF16561	SUPFAM:SSF81296	UniParc:UPI0002761AFE
UniProt:K4ATP2	MapMan:3.2.1.1	:	:	:	:

Description

No Description!

Coordinates

chr1:+:5362049..5364988

Molecular Weight (calculated)

21148.7 Da

IEP (calculated)

10.181

GRAVY (calculated)

-0.278

Length

185 amino acids

Sequence
(BLAST)

001: MPTKSASRDP QQISSYFPSS PIPHTVHIRT IPQDPIAINF FPISRVFGSS PSDSDAWEFQ ENEFMNARER LRLIRAKLAV LEGKMTLAMI DAQKMLDEKQ
101: KMIDRSSKAL QLLRTARIVW TNSASEVLLM QRKMEKSSTG VFSVSLKLYP GRYEIKFVVD GIWKIDPLRP IVHSDGHENN LFIVT

Best Arabidopsis Sequence Match ( AT1G27070.1 )
(BLAST)

001: MVSINSGPIS SFVSRYSMID SDTLLHLSSF GSTFNPNYKA KACIRFARKV CGSTVLGFLE VKPRKKSCCS RCNGVSRMCN KRNLGWDSEG SKDLETEILE
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS

Arabidopsis Description

PTST2Protein PTST homolog 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFY0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.