Factsheet for GSMUA_Achr7P12210_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15220_001	Banana	endoplasmic reticulum	28.11	53.55
Solyc01g010470.2.1	Tomato	plastid	21.39	46.49
GSMUA_Achr9P10940_001	Banana	cytosol	43.78	36.44
Solyc05g006930.2.1	Tomato	cytosol	37.31	31.78
TraesCS4A01G284000.1	Wheat	mitochondrion, nucleus	34.83	30.43
TraesCS4B01G029700.2	Wheat	mitochondrion	36.07	30.08
PGSC0003DMT400068857	Potato	cytosol	35.32	30.02
KRH69376	Soybean	plastid	38.06	29.65
Os03t0686900-01	Rice	plastid	38.81	29.49
VIT_01s0026g01510.t01	Wine grape	plastid	39.05	29.02
KRH74757	Soybean	plastid	37.06	28.82
CDY14708	Canola	plastid	36.07	28.54
CDY16216	Canola	plastid	35.82	28.4
PGSC0003DMT400045404	Potato	mitochondrion, plastid	36.57	27.95
AT1G27070.1	Thale cress	plastid	35.82	27.07
Zm00001d033529_P001	Maize	plastid	35.82	26.62
GSMUA_Achr2P11630_001	Banana	cytosol	11.69	25.97
TraesCS4D01G026700.2	Wheat	plastid	35.57	25.58
Zm00001d013530_P001	Maize	plastid	35.32	24.4
OQU91183	Sorghum	plastid	35.32	24.36
HORVU4Hr1G004470.4	Barley	mitochondrion	37.06	23.21
GSMUA_Achr7P10230_001	Banana	extracellular	15.67	20.45
GSMUA_Achr4P25270_001	Banana	nucleus, plastid	17.16	17.38
Bra024663.1-P	Field mustard	mitochondrion, nucleus	35.82	15.93

Protein Annotations

EnsemblPlants:GSMUA_Achr7P12210_001	EnsemblPlants:GSMUA_Achr7T12210_001	EnsemblPlantsGene:GSMUA_Achr7G12210_001	Gene3D:2.60.40.10	InterPro:AMPK1_CBM	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:Ig_E-set	ncoils:Coil	PANTHER:PTHR10343	PANTHER:PTHR10343:SF47	PFAM:PF16561
SUPFAM:SSF81296	UniParc:UPI000296DECA	UniProt:M0TGV9	MapMan:3.2.1.1	:	:

Description

Putative Isoamylase N-terminal domain containing protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G12210_001]

Coordinates

chr7:+:9732571..9742581

Molecular Weight (calculated)

44756.7 Da

IEP (calculated)

4.684

GRAVY (calculated)

-0.389

Length

402 amino acids

Sequence
(BLAST)

001: MDAGADLEAQ IHEFMHKSGN PNDFPTRVEL IAAGRYDLVE AITIRGDWLT FGWDSKDKNT VDSDTNALGS TELESDGRAI LEDSRVSQER FFDNSCGNVV
101: VTNDVLDSED DPLMAFTSGR LMERESVGTG GGIEGILSRL ERERNLFLSI GKKETGWASP RSNKHFLRET AGDIIASYDK IIVDPSFLNS DLNDPKMHKK
201: AQDLAEAGNG TNALDFDINQ IWLRLQHLES DLASALHLLT SRADAVTAGK GQQISTDELH SLSDAWEFQE TEIVSAQDKL RSTRARMAAL EGKMALEIIE
301: AKKLMEEKKK RVDAAQNALS LLQTVCIVWP NSASEVLLAG SFDGWNSQRR MESSGWGIFS LYLKLYPGRY EIKFIVDGVW KIDPLRPLVH NNGHENNLLI
401: IT

Best Arabidopsis Sequence Match ( AT1G27070.1 )
(BLAST)

001: MVSINSGPIS SFVSRYSMID SDTLLHLSSF GSTFNPNYKA KACIRFARKV CGSTVLGFLE VKPRKKSCCS RCNGVSRMCN KRNLGWDSEG SKDLETEILE
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS

Arabidopsis Description

PTST2Protein PTST homolog 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFY0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.