Factsheet for Zm00001d033529_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91183	Sorghum	plastid	77.08	71.53
Zm00001d013530_P001	Maize	plastid	73.2	68.04
TraesCS4B01G029700.2	Wheat	mitochondrion	50.83	57.05
Os03t0686900-01	Rice	plastid	54.16	55.39
TraesCS4A01G284000.1	Wheat	mitochondrion, nucleus	46.58	54.78
TraesCS4D01G026700.2	Wheat	plastid	52.31	50.63
GSMUA_Achr8P15220_001	Banana	endoplasmic reticulum	17.56	45.02
Solyc01g010470.2.1	Tomato	plastid	15.16	44.32
HORVU4Hr1G004470.4	Barley	mitochondrion	51.94	43.77
GSMUA_Achr7P12210_001	Banana	cytosol	26.62	35.82
Solyc05g006930.2.1	Tomato	cytosol	29.57	33.9
GSMUA_Achr9P10940_001	Banana	cytosol	29.21	32.71
PGSC0003DMT400068857	Potato	cytosol	28.47	32.56
KRH69376	Soybean	plastid	30.5	31.98
KRH74757	Soybean	plastid	29.94	31.33
CDY14708	Canola	plastid	29.02	30.91
PGSC0003DMT400045404	Potato	mitochondrion, plastid	29.76	30.61
CDY16216	Canola	plastid	28.65	30.57
VIT_01s0026g01510.t01	Wine grape	plastid	30.5	30.5
AT1G27070.1	Thale cress	plastid	28.65	29.14
Bra024663.1-P	Field mustard	mitochondrion, nucleus	28.65	17.15
Zm00001d015200_P003	Maize	plastid	9.06	14.8

Protein Annotations

EntrezGene:103643820	Gene3D:2.60.40.10	MapMan:3.2.1.1	UniProt:A0A1D6KZH7	InterPro:AMPK1_CBM	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	ProteinID:ONM07776.1
PFAM:PF16561	PANTHER:PTHR10343	PANTHER:PTHR10343:SF47	SUPFAM:SSF81296	UniParc:UPI0004DE995D	EnsemblPlantsGene:Zm00001d033529
EnsemblPlants:Zm00001d033529_P001	EnsemblPlants:Zm00001d033529_T001	SEG:seg	:	:	:

Description

5'-AMP-activated protein kinase-related

Coordinates

chr1:-:265791290..265806567

Molecular Weight (calculated)

58938.5 Da

IEP (calculated)

5.653

GRAVY (calculated)

-0.651

Length

541 amino acids

Sequence
(BLAST)

001: MPPLVPSLLL PIPALILPAP PRLSRHRCFL PAVSSSSSSS SSPHSREPYR RRRRDTPSQT PTPAPRPSSQ PQPPPRRANA ATPGARSQEE LEAAIYDFMC
101: RSAKPGAFPT REELVAAGRS DLAAAVASSG GWLSLGWSST AAEGPATTAA PCSSGGGHPD YPPETGVYYR GDLAPVSVED SECLRCREDD EEDASPSGRE
201: SGTEEASEVR LNAGIEGMLT RLQKDRERAR PPPRTSTHDT QGQSDDDAGN SGAPSHTAAG GRHIPRAPEN GSVHGSHSQN GTIEGNSTFQ GSNDDAWQTW
301: TLGKGDLSHF EAAEVLPIER RKVSRHDDIA SVQNDIHRSS NGVAVSDFSS DGVGTGRDEI HSRLQILELD LSAALKTLRS RFDKVLSDLS NSNGATVLDD
401: ISDDWEFEET KVMQAQEELR SIRAKIAVLE GKMALEIIER NKIIEDKQRR LDKVEKALSE LRTVCIMWAN PASDVLVVGS FDGWTSQRKL ERSENGMFSL
501: NLRLYPGRYE IKFIVDGVWK NDPLRPTVHN NGHENNLLLV T

Best Arabidopsis Sequence Match ( AT1G27070.1 )
(BLAST)

001: MVSINSGPIS SFVSRYSMID SDTLLHLSSF GSTFNPNYKA KACIRFARKV CGSTVLGFLE VKPRKKSCCS RCNGVSRMCN KRNLGWDSEG SKDLETEILE
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS

Arabidopsis Description

PTST2Protein PTST homolog 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFY0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.