Factsheet for Os03t0686900-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
peroxisome 1
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G029700.2	Wheat	mitochondrion	59.74	65.56
TraesCS4A01G284000.1	Wheat	mitochondrion, nucleus	55.01	63.26
TraesCS4D01G026700.2	Wheat	plastid	58.98	55.81
Zm00001d033529_P001	Maize	plastid	55.39	54.16
OQU91183	Sorghum	plastid	54.82	49.74
HORVU4Hr1G004470.4	Barley	mitochondrion	59.92	49.38
Zm00001d013530_P001	Maize	plastid	53.69	48.8
GSMUA_Achr8P15220_001	Banana	endoplasmic reticulum	18.9	47.39
Solyc01g010470.2.1	Tomato	plastid	16.26	46.49
GSMUA_Achr7P12210_001	Banana	cytosol	29.49	38.81
Solyc05g006930.2.1	Tomato	cytosol	30.62	34.32
GSMUA_Achr9P10940_001	Banana	cytosol	31.19	34.16
PGSC0003DMT400068857	Potato	cytosol	29.68	33.19
VIT_01s0026g01510.t01	Wine grape	plastid	33.84	33.09
KRH69376	Soybean	plastid	31.38	32.17
KRH74757	Soybean	plastid	31.19	31.91
CDY14708	Canola	plastid	30.62	31.89
CDY16216	Canola	plastid	30.43	31.76
PGSC0003DMT400045404	Potato	mitochondrion, plastid	31.38	31.56
AT1G27070.1	Thale cress	plastid	30.81	30.64
Os02t0135900-01	Rice	plastid	10.4	17.97
Bra024663.1-P	Field mustard	mitochondrion, nucleus	30.43	17.81

Protein Annotations

Gene3D:2.60.40.10	MapMan:3.2.1.1	EntrezGene:4333759	ProteinID:AAT85062.1	ProteinID:ABF98262.1	EMBL:AK287681
InterPro:AMPK1_CBM	ProteinID:BAF12850.2	ProteinID:BAS85812.1	ncoils:Coil	ProteinID:EEE59721.1	GO:GO:0000003
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009791	GO:GO:0009987	GO:GO:0010581	GO:GO:0019252
GO:GO:0030246	GO:GO:0030247	GO:GO:2000014	GO:GO:2001066	GO:GO:2001070	GO:GO:2001071
InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	EnsemblPlantsGene:Os03g0686900	EnsemblPlants:Os03t0686900-01	PFAM:PF16561
PANTHER:PTHR10343	PANTHER:PTHR10343:SF47	UniProt:Q10F03	SUPFAM:SSF81296	UniParc:UPI0000DB4AD1	RefSeq:XP_015630691.1
SEG:seg	:	:	:	:	:

Description

FLOURY ENDOSPERM 6CBM48 domain-containing protein, Compound granule formation and starch synthesis (Os03t0686900-01)

Coordinates

chr3:+:27408274..27413223

Molecular Weight (calculated)

57991.6 Da

IEP (calculated)

6.521

GRAVY (calculated)

-0.657

Length

529 amino acids

Sequence
(BLAST)

001: MLPLLLPLPV TPPPPLPSPT LTLAPASAPR RRLVLLAAAA PHHHHHHRRR RVYRRQRAAP TQTRAPRRTL SASNAARGEE DLEEAIYEFM RRSDKPGAFP
101: TRAELVAAGR ADLAAAVDAC GGWLSLGWSS GGAEAGRASS SVGVHPDYPP EAGAAAAAGG ASDLAQGAVW ASSREAEASP SGRQPETEEE ETETKFGTGL
201: DGMLTRLQRE RERVRPPLPR SSDGAGGERD NVALMGQSGA PSHSATGGRY TPKVPDNGNI HSYHPQNGAL EHNKSSKSLT NDAWRTWSLD KGGFSDFQAA
301: EIHSTNSRKS FRHDGLDILA QDDVHGPSNG VAVHDYDIND VDSERDDIHA RLQNLELDLT AALHTLRSRF DKVISDMSEG DGAKAPNGLS DDWEFEETKV
401: MQAQEELRSI RAKIAVLEGK MALEIIEKNK IIEEKQRRLD EAEKALSELR TVYIVWSNPA SEVLLTGSFD GWTSQRRMER SERGTFSLNL RLYPGRYEIK
501: FIVDGVWRND PLRPLVSNNG HENNLLTVT

Best Arabidopsis Sequence Match ( AT1G27070.1 )
(BLAST)

001: MVSINSGPIS SFVSRYSMID SDTLLHLSSF GSTFNPNYKA KACIRFARKV CGSTVLGFLE VKPRKKSCCS RCNGVSRMCN KRNLGWDSEG SKDLETEILE
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS

Arabidopsis Description

PTST2Protein PTST homolog 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFY0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.