CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033529_P001	Maize	plastid	71.53	77.08
TraesCS4B01G029700.2	Wheat	mitochondrion	47.17	57.05
TraesCS4A01G284000.1	Wheat	mitochondrion, nucleus	44.08	55.87
Os03t0686900-01	Rice	plastid	49.74	54.82
TraesCS4D01G026700.2	Wheat	plastid	48.03	50.09
GSMUA_Achr8P15220_001	Banana	endoplasmic reticulum	16.81	46.45
HORVU4Hr1G004470.4	Barley	mitochondrion	48.89	44.39
Solyc01g010470.2.1	Tomato	plastid	14.07	44.32
GSMUA_Achr7P12210_001	Banana	cytosol	24.36	35.32
Solyc05g006930.2.1	Tomato	cytosol	27.62	34.11
PGSC0003DMT400068857	Potato	cytosol	27.1	33.4
KRH69376	Soybean	plastid	28.99	32.75
GSMUA_Achr9P10940_001	Banana	cytosol	26.59	32.09
VIT_01s0026g01510.t01	Wine grape	plastid	29.67	31.98
KRH74757	Soybean	plastid	27.79	31.33
PGSC0003DMT400045404	Potato	mitochondrion, plastid	27.62	30.61
AT1G27070.1	Thale cress	plastid	27.79	30.45
CDY16216	Canola	plastid	26.07	29.98
CDY14708	Canola	plastid	26.07	29.92
KXG29421	Sorghum	cytosol, plastid	9.43	17.86
Bra024663.1-P	Field mustard	mitochondrion, nucleus	26.07	16.81

Protein Annotations

Gene3D:2.60.40.10	MapMan:3.2.1.1	UniProt:A0A1Z5S5H1	InterPro:AMPK1_CBM	ncoils:Coil	GO:GO:0000003
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005975	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507
GO:GO:0009536	GO:GO:0009791	GO:GO:0009987	GO:GO:0019252	GO:GO:0030246	GO:GO:2000014
GO:GO:2001066	GO:GO:2001070	InterPro:IPR013783	InterPro:Ig-like_fold	InterPro:Ig_E-set	EnsemblPlants:OQU91183
ProteinID:OQU91183	ProteinID:OQU91183.1	PFAM:PF16561	PANTHER:PTHR10343	PANTHER:PTHR10343:SF47	EnsemblPlantsGene:SORBI_3001G134100
SUPFAM:SSF81296	SignalP:SignalP-noTM	UniParc:UPI000B8B9F6C	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:10572265..10578280

Molecular Weight (calculated)

63819.0 Da

IEP (calculated)

5.183

GRAVY (calculated)

-0.642

Length

583 amino acids

Sequence
(BLAST)

001: MAALVPSLLL PAPALILPAP PRCCHPRRRC FAPAPLAASS SSSSSTSPHS RQPYYRRRGR RLHDASSQTP TPAPRPSSQP QPRPRDANAA APRARGQEEL
101: EAAIYDFMCR SAKPGAFPTR EELVAAGRSD LAAAVSSSGG WLSLGWSSST AAEGPDTMAA PRSSGGAHPD YPPETGVYYR GDLVPGSVED SEWWVTGIAL
201: CSAVLFYALA RCLAEFRCLR CREEEEDDDD DEEEEASSSG REAETEENSE IRFKAGIEGM LTRLQKDRER ARPPPRSSTH DTQGQSDDDA GNSGAPSHTA
301: AGGRHIPRVP ENGSVHGSHS QNGTIEGNNT LQSSSDDAWK TWTLGKGGLS HFEAAEVLPT ERRKLSQHGD IASVQNDVQR SSNGVAVSDY PSDGVGTERD
401: EIHSRLQTLE LDLSAALKTL RSKFDKILSD VSNSNGATVL DDISDDWEFE ETKVMQAQEE LRSIRAKIAV LEGKIALEII ERNKIIEDKQ RRLDEVEKAL
501: SELRTVCIMW ANPASDVLVV GSFDGWTSQR KMERSENGMF SLNLRLYPGR YEIKFIVDGV WKNDPLRPTV HNNGHENNLL LVT

Best Arabidopsis Sequence Match ( AT1G27070.1 )
(BLAST)

001: MVSINSGPIS SFVSRYSMID SDTLLHLSSF GSTFNPNYKA KACIRFARKV CGSTVLGFLE VKPRKKSCCS RCNGVSRMCN KRNLGWDSEG SKDLETEILE
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS

Arabidopsis Description

PTST2Protein PTST homolog 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFY0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.