Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- extracellular 2
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G029700.2 | Wheat | mitochondrion | 79.61 | 92.32 |
| HORVU4Hr1G004470.4 | Barley | mitochondrion | 72.45 | 63.08 |
| Os03t0686900-01 | Rice | plastid | 55.81 | 58.98 |
| Zm00001d033529_P001 | Maize | plastid | 50.63 | 52.31 |
| OQU91183 | Sorghum | plastid | 50.09 | 48.03 |
| Zm00001d013530_P001 | Maize | plastid | 48.66 | 46.74 |
| GSMUA_Achr8P15220_001 | Banana | endoplasmic reticulum | 17.35 | 45.97 |
| Solyc01g010470.2.1 | Tomato | plastid | 14.85 | 44.86 |
| GSMUA_Achr7P12210_001 | Banana | cytosol | 25.58 | 35.57 |
| PGSC0003DMT400068857 | Potato | cytosol | 28.09 | 33.19 |
| Solyc05g006930.2.1 | Tomato | cytosol | 27.55 | 32.63 |
| GSMUA_Achr9P10940_001 | Banana | cytosol | 27.73 | 32.09 |
| KRH69376 | Soybean | plastid | 29.16 | 31.59 |
| VIT_01s0026g01510.t01 | Wine grape | plastid | 29.34 | 30.31 |
| KRH74757 | Soybean | plastid | 27.55 | 29.79 |
| CDY14708 | Canola | plastid | 26.65 | 29.33 |
| PGSC0003DMT400045404 | Potato | mitochondrion, plastid | 27.55 | 29.28 |
| CDY16216 | Canola | plastid | 26.3 | 28.99 |
| AT1G27070.1 | Thale cress | plastid | 27.19 | 28.57 |
| Bra024663.1-P | Field mustard | mitochondrion, nucleus | 26.3 | 16.26 |
| TraesCS6D01G090900.1 | Wheat | cytosol | 7.33 | 14.04 |
Protein Annotations
| Gene3D:2.60.40.10 | MapMan:3.2.1.1 | InterPro:AMPK1_CBM | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0019252 | GO:GO:0030246 | GO:GO:2000014 | GO:GO:2001066 |
| GO:GO:2001070 | InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:Ig_E-set | PFAM:PF16561 | PANTHER:PTHR10343 |
| PANTHER:PTHR10343:SF47 | SUPFAM:SSF81296 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS4D01G026700 | EnsemblPlants:TraesCS4D01G026700.2 | TIGR:cd02859 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4D:+:11855340..11861920
Molecular Weight (calculated)
61553.7 Da
IEP (calculated)
5.735
GRAVY (calculated)
-0.718
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPFLLSLSL PALTLPLPPA PAPAPRRHRV FAAPAYGPQP CRGRVCVCAA YRPPPRQPYR RQPAPAPAPD PRPRPSNAPA PPQRDPRGQE EVEEAIYDFM
101: RRSDKPGAFP TRAELLAAGR ADLAAAVESS GGWLSLGWSW SSDDDARRPA ASSAGPGVHP DYPPEAGPSG RPPNSAADSV REQQEPTRSG RQPETEETEE
201: AGSGAGLEGM LARLRRERER ARPPPRSKNQ AGGQGQNGAL MNHNGAPSRS PTDGMYTRRI PVNGNIHRSH SQNGIPEANK SSSSANDAWR TWSLDKSRFS
301: DFEAAEIHPL SRKPPKRADL DTVLIEDDVP GPSNGVVIND YPSDHVDSER DEIHARFQNL EFDLADSLKT LRSRFDGVSS YMSNGEEADV VNGFSDDWEF
401: EETKVMHAQE ELRTIRAKIA VLEGKVALEI IEKNKIIEEK QTRLDEVEKA LSELRTVSVV WPNPASEVLL TGSFDGWTSQ RRMEQSESGI FSYNLRLYPG
501: RYEVMACYSA SIVTTFTSSD SGCSFVLQIK FIVDGVWKND PLRPTVNNHG NENNLMIVT
101: RRSDKPGAFP TRAELLAAGR ADLAAAVESS GGWLSLGWSW SSDDDARRPA ASSAGPGVHP DYPPEAGPSG RPPNSAADSV REQQEPTRSG RQPETEETEE
201: AGSGAGLEGM LARLRRERER ARPPPRSKNQ AGGQGQNGAL MNHNGAPSRS PTDGMYTRRI PVNGNIHRSH SQNGIPEANK SSSSANDAWR TWSLDKSRFS
301: DFEAAEIHPL SRKPPKRADL DTVLIEDDVP GPSNGVVIND YPSDHVDSER DEIHARFQNL EFDLADSLKT LRSRFDGVSS YMSNGEEADV VNGFSDDWEF
401: EETKVMHAQE ELRTIRAKIA VLEGKVALEI IEKNKIIEEK QTRLDEVEKA LSELRTVSVV WPNPASEVLL TGSFDGWTSQ RRMEQSESGI FSYNLRLYPG
501: RYEVMACYSA SIVTTFTSSD SGCSFVLQIK FIVDGVWKND PLRPTVNNHG NENNLMIVT
001: MVSINSGPIS SFVSRYSMID SDTLLHLSSF GSTFNPNYKA KACIRFARKV CGSTVLGFLE VKPRKKSCCS RCNGVSRMCN KRNLGWDSEG SKDLETEILE
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS
Arabidopsis Description
PTST2Protein PTST homolog 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFY0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.