Factsheet for GSMUA_Achr9P10940_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P15220_001	Banana	endoplasmic reticulum	25.26	57.82
Solyc01g010470.2.1	Tomato	plastid	18.01	47.03
GSMUA_Achr7P12210_001	Banana	cytosol	36.44	43.78
Solyc05g006930.2.1	Tomato	cytosol	33.13	33.9
PGSC0003DMT400068857	Potato	cytosol	33.13	33.83
TraesCS4A01G284000.1	Wheat	mitochondrion, nucleus	31.26	32.83
TraesCS4B01G029700.2	Wheat	mitochondrion	31.68	31.74
Os03t0686900-01	Rice	plastid	34.16	31.19
VIT_01s0026g01510.t01	Wine grape	plastid	33.95	30.31
PGSC0003DMT400045404	Potato	mitochondrion, plastid	32.51	29.85
KRH69376	Soybean	plastid	31.47	29.46
Zm00001d033529_P001	Maize	plastid	32.71	29.21
KRH74757	Soybean	plastid	31.06	29.01
CDY16216	Canola	plastid	29.81	28.4
AT1G27070.1	Thale cress	plastid	31.06	28.2
CDY14708	Canola	plastid	29.61	28.15
TraesCS4D01G026700.2	Wheat	plastid	32.09	27.73
Zm00001d013530_P001	Maize	plastid	32.09	26.63
OQU91183	Sorghum	plastid	32.09	26.59
GSMUA_Achr2P11630_001	Banana	cytosol	9.11	24.31
HORVU4Hr1G004470.4	Barley	mitochondrion	32.09	24.14
GSMUA_Achr7P10230_001	Banana	extracellular	12.42	19.48
GSMUA_Achr4P25270_001	Banana	nucleus, plastid	14.08	17.13
Bra024663.1-P	Field mustard	mitochondrion, nucleus	29.81	15.93

Protein Annotations

EnsemblPlants:GSMUA_Achr9P10940_001	EnsemblPlants:GSMUA_Achr9T10940_001	EnsemblPlantsGene:GSMUA_Achr9G10940_001	Gene3D:2.60.40.10	InterPro:AMPK1_CBM	InterPro:IPR013783
InterPro:Ig-like_fold	InterPro:Ig_E-set	ncoils:Coil	PANTHER:PTHR10343	PANTHER:PTHR10343:SF47	PFAM:PF16561
SUPFAM:SSF81296	UniParc:UPI000296CA06	UniProt:M0TZA3	MapMan:3.2.1.1	:	:

Description

Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G10940_001]

Coordinates

chr9:+:7118748..7125476

Molecular Weight (calculated)

54927.7 Da

IEP (calculated)

6.039

GRAVY (calculated)

-0.278

Length

483 amino acids

Sequence
(BLAST)

001: MAPRSMDVEA ELYEFMRRSA KPMDFPTRDE LVAAGRADLA ETVAAQGGWL TFGWDLDDGG EEVIDGSQSM SDVAQEDGEV YQERVLNGSL GTNPATALGC
101: EDRSAAPSFS GRSLEMENLE DGGVEGILSR LEKERSFSLA LASRGKVLWI IPFLMLVHKL MITSFINELS LFENYVYASL YKFRSFINSY VVLIAHKLAV
201: SGNERNINMI QQNLNISFYM ILMVYILKVG NWKMLMAQKV QCQTWRSWSI QRAVAETVPT DDRKMLEDDS LKVEWSTMHI QTQNSFMSHN GMKESFADKS
301: QRHLHLQHLE ADLSSALWLV RSRANGVVSH KHQGNSIDEL HRPSDAWEFQ ETEIVNARDK LQSVRAKLAI LEGNLSFKIM EARKVMEERQ KRIDAAQNAL
401: HLLRMAYIVW PNSASEVLLA GSFDGWTGQR RMERSSSCIF TLQLKLYPGR YEIKFIVDGV WKTDPLHPIV HNNGHENNLL IVD

Best Arabidopsis Sequence Match ( AT1G27070.1 )
(BLAST)

001: MVSINSGPIS SFVSRYSMID SDTLLHLSSF GSTFNPNYKA KACIRFARKV CGSTVLGFLE VKPRKKSCCS RCNGVSRMCN KRNLGWDSEG SKDLETEILE
101: FMKNSEKPGM FPSKKDLIRS GRFDLVERIV NQGGWLSMGW DLDEQEEKVR VNENVTPQDL HIEKQLPNCN SPEMDKTLNH GDLDLSSNLS SSTEQVESRN
201: DSGIEGILTR LEKERNLSLG ISVRENGKSN GAMHDISPNG SVPWSSRIVT ASEIQEVDGS RGSGEYAQSR YQGAKSVSGK PGLSDSPTSE TWRTWSMRRA
301: GFTDEDFEAA EISSSGLTGV KKDDTKKDSG DSMNGKDRIA SSSEDVNKTH IKHRLQQLQS ELSSVLHSLR SPPDKVVTSK DSETTAGNLE NLSDDWEYKE
401: NEIIHAQNKL RSTRAKLAVL EGKMAMAIID AQRIVREKQR RIDHASRALR LLRTASIVWP NSASEVLLTG SFDGWSTQRK MKKAENGVFS LSLKLYPGKY
501: EIKFIVDGQW KVDPLRPIVT SGGYENNLLI IS

Arabidopsis Description

PTST2Protein PTST homolog 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LFY0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.